RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 HARBI1Q96MB7 349 aa8.55□□□□□ -1.04
CAPN1-221ENST00000531068 TMEM68Q96MH6 324 aa8.55□□□□□ -1.04
CAPN1-221ENST00000531068 HIPK2Q9H2X6 1198 aa8.55□□□□□ -1.04
CAPN1-221ENST00000531068 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
CAPN1-221ENST00000531068 SLC25A17O43808 307 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 RAMP3O60896 148 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 CA2P00918 260 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 EGR2P11161 476 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-221ENST00000531068 HOXD3P31249 432 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-221ENST00000531068 KRTAP10-11P60412 298 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 S100A10P60903 97 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 ZNF616Q08AN1 781 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 PJVKQ0ZLH3 352 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 FHL3Q13643 280 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 DEFB136Q30KP8 78 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 TMEM177Q53S58 311 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 NMSQ5H8A3 153 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 LFNGQ8NES3 379 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 PCNPQ8WW12 178 aaKnown RBP8.54□□□□□ -1.04
CAPN1-221ENST00000531068 ARPC1AQ92747 370 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 HSD17B10Q99714 261 aaKnown RBP8.54□□□□□ -1.04
CAPN1-221ENST00000531068 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 SLC25A31Q9H0C2 315 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 PRELID3BQ9Y3B1 194 aa8.54□□□□□ -1.04
CAPN1-221ENST00000531068 TMEM218A2RU14 115 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 H3BUA1 57 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 INSL3P51460 131 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 NDPQ00604 133 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 BAXQ07812 192 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 SLC35G3Q8N808 338 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 TEX45Q8NA69 505 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 DMBX1Q8NFW5 382 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 OR51H1Q8NH63 302 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 OSR1Q8TAX0 266 aaPredicted RBP8.53□□□□□ -1.04
CAPN1-221ENST00000531068 LINC00052Q96N35 136 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 OR5B12Q96R08 314 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 GNB4Q9HAV0 340 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 STRAPQ9Y3F4 350 aaKnown RBP8.53□□□□□ -1.04
CAPN1-221ENST00000531068 FBXO7Q9Y3I1 522 aa8.53□□□□□ -1.04
CAPN1-221ENST00000531068 A0A0G2JLM5 398 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 A0A0G2JRQ6 117 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 SEC14L6B5MCN3 397 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 K7EIL1 84 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 SOX15O60248 233 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 PITX3O75364 302 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 IGLV2-23P01705 113 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 CRYGBP07316 175 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 IL6RP08887 468 aaPredicted RBP8.52□□□□□ -1.05
CAPN1-221ENST00000531068 SPP1P10451 314 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 NKX2-1P43699 371 aaPredicted RBP8.52□□□□□ -1.05
CAPN1-221ENST00000531068 CAV2P51636 162 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 TAS2R30P59541 319 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 UBE2KP61086 200 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 GNB1P62873 340 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 ZNF266Q14584 549 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 FAM74A1Q5RGS3 127 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
CAPN1-221ENST00000531068 BTNL8Q6UX41 500 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 Q6ZRM9 215 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 OR1S2Q8NGQ3 325 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 TMED6Q8WW62 240 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 FAM103A1Q9BTL3 118 aaKnown RBP8.52□□□□□ -1.05
CAPN1-221ENST00000531068 SMDT1Q9H4I9 107 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 ZC4H2Q9NQZ6 224 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 ZNF355PQ9NSJ1 428 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 COA4Q9NYJ1 87 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 FBXL17Q9UF56 701 aa8.52□□□□□ -1.05
CAPN1-221ENST00000531068 CARHSP1Q9Y2V2 147 aaKnown RBP8.52□□□□□ -1.05
CAPN1-221ENST00000531068 WI2-2373I1.2A0A1W2PRP0 233 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 SRRM4A7MD48 611 aaKnown RBP8.51□□□□□ -1.05
CAPN1-221ENST00000531068 UMAD1C9J7I0 102 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 FAM90A26D6RGX4 464 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 LINC01619G3V211 115 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 BRI3O95415 125 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 LY86O95711 162 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 TRGV3P03979 118 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 HSPB1P04792 205 aaKnown RBP8.51□□□□□ -1.05
CAPN1-221ENST00000531068 LGALS1P09382 135 aaKnown RBP8.51□□□□□ -1.05
CAPN1-221ENST00000531068 LPAR6P43657 344 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 TPPP2P59282 170 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 POU2AF1Q16633 256 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 AARDQ4LEZ3 155 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 FAM219AQ8IW50 185 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 OR2C3Q8N628 320 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 RHOVQ96L33 236 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 MS4A10Q96PG2 267 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 RAB40CQ96S21 281 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 SEC11CQ9BY50 192 aa8.51□□□□□ -1.05
CAPN1-221ENST00000531068 LYRM2Q9NU23 88 aaPredicted RBP8.51□□□□□ -1.05
CAPN1-221ENST00000531068 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
CAPN1-221ENST00000531068 A0A1B0GW64 132 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 ZNF705EA8MWA4 302 aaPredicted RBP8.5□□□□□ -1.05
CAPN1-221ENST00000531068 OVOL1O14753 267 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 ACTL6BO94805 426 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 ATG12O94817 140 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 CD5P06127 495 aa8.5□□□□□ -1.05
CAPN1-221ENST00000531068 CATR1Q13166 79 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms