RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 E9PLD3 99 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 MGST1P10620 155 aaKnown RBP6.68□□□□□ -1.34
CSDE1-214ENST00000530886 MIC13Q5XKP0 118 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 DHRS13Q6UX07 377 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 SSX8Q7RTT4 187 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 FAM168AQ92567 244 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 C1orf159Q96HA4 380 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 ZNF747Q9BV97 191 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 CHRNA10Q9GZZ6 450 aa6.68□□□□□ -1.34
CSDE1-214ENST00000530886 SLC31A1O15431 190 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 SYNGR1O43759 233 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 DKK1O94907 266 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 FCGR2BP31994 310 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-214ENST00000530886 HBBP68871 147 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 GUSBP1Q15486 140 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 TMEM177Q53S58 311 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 PRO0461Q9UI25 63 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 DUSP13Q9UII6 198 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 INSIG2Q9Y5U4 225 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 KBTBD11-OT1A0A1B0GTJ5 212 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 CT45A10P0DMU9 189 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 GABRG2P18507 467 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 NTF4P34130 210 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 G6PCP35575 357 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 GPR12P47775 334 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 PRR20EP86478 221 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 PRR20CP86479 221 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 PRR20DP86480 221 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 PRR20BP86481 221 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 PRR20AP86496 221 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 LGALS9BQ3B8N2 356 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 CT83Q5H943 113 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 LGALS9CQ6DKI2 356 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 MKXQ8IYA7 352 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 TMEM133Q9H2Q1 129 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 SERTAD4Q9NUC0 356 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 SS18L2Q9UHA2 77 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 FOXH1O75593 365 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 CA1P00915 261 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-214ENST00000530886 MYF5P13349 255 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 COL9A1P20849 921 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 OR1L3Q8NH93 324 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 RNF183Q96D59 192 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 SPANXA1Q9NS26 97 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 HILPDAQ9Y5L2 63 aa6.67□□□□□ -1.34
CSDE1-214ENST00000530886 VPS13AQ96RL7 3174 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ANKRD37Q7Z713 158 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 SNRNP40Q96DI7 357 aaKnown RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 C19orf24Q9BVV8 132 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ESPL1Q14674 2120 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 PRUNE2Q8WUY3 3088 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 TRAV24A0A0B4J272 114 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 GGTLC3B5MD39 225 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 BRI3O95415 125 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 VDAC2P45880 294 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ARL4DP49703 201 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ZNF157P51786 506 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 HERV-K104P63124 156 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 WFDC2Q14508 124 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 NRN1LQ496H8 165 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 PIGCQ92535 297 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ZNF407Q9C0G0 2248 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 ZNF16P17020 682 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 FBLP22087 321 aaKnown RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 GATA3P23771 443 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 BRWD1-AS2P59051 145 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 TAS2R45P59539 299 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 TFF2Q03403 129 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 CATR1Q13166 79 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 STPG3Q8N7X2 389 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 GATD1Q8NB37 220 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 CACNG8Q8WXS5 425 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 RAB37Q96AX2 223 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 CDX2Q99626 313 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 C1QTNF5Q9BXJ0 243 aa6.66□□□□□ -1.34
CSDE1-214ENST00000530886 MBNL3Q9NUK0 354 aaKnown RBP6.66□□□□□ -1.34
CSDE1-214ENST00000530886 TEX50A0A1B0GTY4 177 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 SPINK8P0C7L1 97 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 Q6ZR03 302 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 RD3Q7Z3Z2 195 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 ZADH2Q8N4Q0 377 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 IL1F10Q8WWZ1 152 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 ZNF503Q96F45 646 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 VCX2Q9H322 139 aa6.65□□□□□ -1.34
CSDE1-214ENST00000530886 CELSR3Q9NYQ7 3312 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 ZNF716A6NP11 495 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 HIGD1CA8MV81 97 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 SRSF1Q07955 248 aaKnown RBP eCLIP6.65□□□□□ -1.35
CSDE1-214ENST00000530886 TMEM196Q5HYL7 178 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 H2BFWTQ7Z2G1 175 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 PIP4P2Q8N4L2 257 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 OR9G1Q8NH87 305 aa6.65□□□□□ -1.35
CSDE1-214ENST00000530886 C18orf15Q96N68 181 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms