RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SULT4A1Q9BR01 284 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 FAAP24Q9BTP7 215 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 TMEM59Q9BXS4 323 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 EDA2RQ9HAV5 297 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 ZNF355PQ9NSJ1 428 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 CNOT2Q9NZN8 540 aaKnown RBP4.84□□□□□ -1.63
CSDE1-213ENST00000530784 NUBP2Q9Y5Y2 271 aa4.84□□□□□ -1.63
CSDE1-213ENST00000530784 STAB2Q8WWQ8 2551 aa4.84□□□□□ -1.64
CSDE1-213ENST00000530784 A0A0G2JLM5 398 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 EFCAB10A6NFE3 127 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 ERICH4A6NGS2 130 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 H0Y980 276 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 H3BUA1 57 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 ITGB1BP1O14713 200 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 NAPSAO96009 420 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 IFNA6P05013 189 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 ZBTB25P24278 435 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 WNT4P56705 351 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 ST3GAL4Q11206 333 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 FXYD3Q14802 87 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 KRTAP13-3Q3SY46 172 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 KIAA2026Q5HYC2 2103 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 RBM48Q5RL73 367 aaKnown RBP4.83□□□□□ -1.64
CSDE1-213ENST00000530784 TTC23Q5W5X9 447 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 GLT8D1Q68CQ7 371 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 OR10K2Q6IF99 312 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 STEAP1BQ6NZ63 245 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 ZNF880Q6PDB4 577 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 ADAMTSL5Q6ZMM2 481 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 DRAXINQ8NBI3 349 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-213ENST00000530784 KCNG3Q8TAE7 436 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 GTSF1Q8WW33 167 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 CYGBQ8WWM9 190 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 TSNAXQ99598 290 aaKnown RBP4.83□□□□□ -1.64
CSDE1-213ENST00000530784 NICN1Q9BSH3 213 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 PARP12Q9H0J9 701 aaKnown RBP4.83□□□□□ -1.64
CSDE1-213ENST00000530784 OR1A1Q9P1Q5 309 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 MLXQ9UH92 298 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 RNF24Q9Y225 148 aa4.83□□□□□ -1.64
CSDE1-213ENST00000530784 EPPK1P58107 5090 aaKnown RBP4.82□□□□□ -1.64
CSDE1-213ENST00000530784 A0A0A6YYD4 124 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 CNIH1O95406 144 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 APOA2P02652 100 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 IGKV1-16P04430 117 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 HTR2CP28335 458 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 CEACAM6P40199 344 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 HLA-DRB3P79483 266 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 UNC119Q13432 240 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 KLF5Q13887 457 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-213ENST00000530784 LCN12Q6JVE5 192 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 AHSA2Q719I0 299 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 PDPNQ86YL7 162 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 OR9G4Q8NGQ1 327 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 PHYHIPQ92561 330 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 AGMATQ9BSE5 352 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 ST6GALNAC5Q9BVH7 336 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 TM2D1Q9BX74 207 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 TUBA4BQ9H853 241 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 C12orf4Q9NQ89 552 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 PLEKHJ1Q9NW61 149 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 ZNF221Q9UK13 617 aa4.82□□□□□ -1.64
CSDE1-213ENST00000530784 TRBV6-6A0A0A6YYG2 114 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 TMEM14DPA8MWL7 114 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 M0R1X1 148 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 LGALS7P47929 136 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 SYNJ2BPP57105 145 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 CBX3Q13185 183 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 INSL4Q14641 139 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 TATDN3Q17R31 274 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 ACSM3Q53FZ2 586 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 HSD17B12Q53GQ0 312 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 C1orf100Q5SVJ3 147 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 C8orf59Q8N0T1 100 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-213ENST00000530784 Q8N402 240 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 DHRSXQ8N5I4 330 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 MS4A15Q8N5U1 240 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 PACRGLQ8N7B6 248 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 OR5T1Q8NG75 326 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 PTX4Q96A99 478 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-213ENST00000530784 TMED9Q9BVK6 235 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 LPAR5Q9H1C0 372 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 C8orf4Q9NR00 106 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 SLC35D1Q9NTN3 355 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 COA4Q9NYJ1 87 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 PEF1Q9UBV8 284 aaKnown RBP4.81□□□□□ -1.64
CSDE1-213ENST00000530784 AK3Q9UIJ7 227 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
CSDE1-213ENST00000530784 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
CSDE1-213ENST00000530784 SOCS1O15524 211 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 OR2A4O95047 310 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 BRI3O95415 125 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 SCTP09683 121 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 SRMP19623 302 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 SERPINB10P48595 397 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 CNN1P51911 297 aaKnown RBP4.8□□□□□ -1.64
CSDE1-213ENST00000530784 MFAP2P55001 183 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 SSTP61278 116 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 QRFPP83859 136 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms