RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 CBLN1P23435 193 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 FCGR2BP31994 310 aaPredicted RBP12.93□□□□□ -0.34
CCS-205ENST00000530384 INPP1P49441 399 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 ELLP55199 621 aaPredicted RBP12.93□□□□□ -0.34
CCS-205ENST00000530384 SPCS3P61009 180 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 SRPXP78539 464 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 DEFB114Q30KQ6 69 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
CCS-205ENST00000530384 ZNF57Q68EA5 555 aaPredicted RBP12.93□□□□□ -0.34
CCS-205ENST00000530384 Q6ZRM9 215 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 GTSCR1Q86UQ5 136 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 UBAC2Q8NBM4 344 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 MARC2Q969Z3 335 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 TXN2Q99757 166 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 CACFD1Q9UGQ2 172 aa12.93□□□□□ -0.34
CCS-205ENST00000530384 TMEM213A2RRL7 107 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 CORTO00230 105 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 MFAP4P55083 255 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 SUPT4H1P63272 117 aaKnown RBP12.92□□□□□ -0.34
CCS-205ENST00000530384 TMEM128Q5BJH2 165 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 TRIQKQ629K1 86 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
CCS-205ENST00000530384 GPR146Q96CH1 333 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 CACNG5Q9UF02 275 aa12.92□□□□□ -0.34
CCS-205ENST00000530384 A0A0B4J2A0 478 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 IGHV3-35A0A0C4DH35 117 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
CCS-205ENST00000530384 NDUFA4O00483 81 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 MT-CO2P00403 227 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 LGI3Q8N145 548 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 Q8N1Y9 231 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 UXS1Q8NBZ7 420 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 TMEM190Q8WZ59 177 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 MRPL27Q9P0M9 148 aaKnown RBP12.91□□□□□ -0.34
CCS-205ENST00000530384 SHPKQ9UHJ6 478 aa12.91□□□□□ -0.34
CCS-205ENST00000530384 NAP1L6A6NFF2 107 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
CCS-205ENST00000530384 CTSGP08311 255 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 SULT1A3P0DMM9 295 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 SULT1A4P0DMN0 295 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
CCS-205ENST00000530384 EDN2P20800 178 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 ADMP35318 185 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 RELQ04864 619 aaPredicted RBP12.9□□□□□ -0.34
CCS-205ENST00000530384 RBMS2Q15434 407 aaKnown RBP12.9□□□□□ -0.34
CCS-205ENST00000530384 TM4SF20Q53R12 229 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 C11orf87Q6NUJ2 197 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 CACNG8Q8WXS5 425 aa12.9□□□□□ -0.34
CCS-205ENST00000530384 DAZ1Q9NQZ3 744 aaKnown RBP12.9□□□□□ -0.34
CCS-205ENST00000530384 A8MZ25 164 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 GNG7O60262 68 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 IGHV4-30-4P0DP06 118 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 BAK1Q16611 211 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 ASCL2Q99929 193 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 PRR13Q9NZ81 148 aa12.89□□□□□ -0.35
CCS-205ENST00000530384 DUXBA0A1W2PPF3 345 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 ZNF785A8K8V0 405 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 HTR2BP41595 481 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 NPBWR1P48145 328 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 CCR6P51684 374 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 GUCA2BQ16661 112 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 NMSQ5H8A3 153 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 CENPSQ8N2Z9 138 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
CCS-205ENST00000530384 MLXQ9UH92 298 aa12.88□□□□□ -0.35
CCS-205ENST00000530384 TRAV25A0A0B4J276 109 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 K7EMT4 169 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 VAMP1P23763 118 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 CD81P60033 236 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 SMCO1Q147U7 214 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 BTNL8Q6UX41 500 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 WDR89Q96FK6 387 aaPredicted RBP12.87□□□□□ -0.35
CCS-205ENST00000530384 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
CCS-205ENST00000530384 C7orf50Q9BRJ6 194 aaKnown RBP12.87□□□□□ -0.35
CCS-205ENST00000530384 C20orf24Q9BUV8 137 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 U3KQK5 164 aa12.87□□□□□ -0.35
CCS-205ENST00000530384 C15orf62A8K5M9 175 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 CENPXA8MT69 81 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 OPRK1P41145 380 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 UBE2MP61081 183 aaKnown RBP12.86□□□□□ -0.35
CCS-205ENST00000530384 SBSPONQ8IVN8 264 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 HIPK2Q9H2X6 1198 aa12.86□□□□□ -0.35
CCS-205ENST00000530384 A0A1B0GU03 582 aa12.85□□□□□ -0.35
CCS-205ENST00000530384 RPS10-NUDT3A0A1W2PQS6 291 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms