RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 HLA-EP13747 358 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 CXCL2P19875 107 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 CXCL3P19876 107 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 CD40LGP29965 261 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 MIPP30301 263 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 FABP5Q01469 135 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 DMTNQ08495 405 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 GNA13Q14344 377 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 COA5Q86WW8 74 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 PACRGQ96M98 296 aaPredicted RBP1.34□□□□□ -2.19
GMDS-206ENST00000530075 MIEN1Q9BRT3 115 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 FAM215AQ9Y5M1 114 aa1.34□□□□□ -2.19
GMDS-206ENST00000530075 IGF2RP11717 2491 aa1.34□□□□□ -2.2
GMDS-206ENST00000530075 PTPN13Q12923 2485 aa1.34□□□□□ -2.2
GMDS-206ENST00000530075 MYH1P12882 1939 aa1.34□□□□□ -2.2
GMDS-206ENST00000530075 EML5Q05BV3 1969 aa1.34□□□□□ -2.2
GMDS-206ENST00000530075 CEP295Q9C0D2 2601 aa1.34□□□□□ -2.2
GMDS-206ENST00000530075 LAMA4Q16363 1823 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 SPTAN1Q13813 2472 aaKnown RBP1.33□□□□□ -2.2
GMDS-206ENST00000530075 COL6A6A6NMZ7 2263 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 CEP192Q8TEP8 1941 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 COL12A1Q99715 3063 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 TMSB15BA0A087X1C1 80 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 TEX50A0A1B0GTY4 177 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 TINCRA0A1B0GVN0 87 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 RFPL4AA6NLU0 287 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 C2orf74A8MZ97 194 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 RFPL4AL1F8VTS6 287 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 ITGB1BP1O14713 200 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 YEATS4O95619 227 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 IGHV1-69P01742 117 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 LYNX1P0DP58 116 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 IFNGR2P38484 337 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 XCL1P47992 114 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 CDK9P50750 372 aaKnown RBP1.33□□□□□ -2.2
GMDS-206ENST00000530075 SNAP25P60880 206 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 C1orf174Q8IYL3 243 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 LRRC34Q8IZ02 419 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 TMEM251Q8N6I4 163 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 SLC37A2Q8TED4 501 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 SMIM19Q96E16 107 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 CPNE2Q96FN4 548 aaPredicted RBP1.33□□□□□ -2.2
GMDS-206ENST00000530075 TIPINQ9BVW5 301 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 IMP3Q9NV31 184 aaKnown RBP1.33□□□□□ -2.2
GMDS-206ENST00000530075 EMC3Q9P0I2 261 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 URB1O60287 2271 aaKnown RBP1.33□□□□□ -2.2
GMDS-206ENST00000530075 POLQO75417 2590 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 KIAA2026Q5HYC2 2103 aa1.33□□□□□ -2.2
GMDS-206ENST00000530075 SPTA1P02549 2419 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 MYO7AQ13402 2215 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 UBR5O95071 2799 aaPredicted RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 PCNX1Q96RV3 2341 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 C1orf232A0A0U1RR37 186 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 ZNF705FA8MVS1 300 aaPredicted RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 GOLGA8KD6RF30 607 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 GOLGA8MH3BSY2 632 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 M0R381 172 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 CETN3O15182 167 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 BIRC5O15392 142 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 NAPSAO96009 420 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 HOXA6P31267 233 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 EMP2P54851 167 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 TMEM33P57088 247 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 BTN3A2P78410 334 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 ERHP84090 104 aaKnown RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 MGAT3Q09327 533 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 JOSD1Q15040 202 aaPredicted RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 EBPQ15125 230 aaKnown RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 FAM19A5Q7Z5A7 132 aaPredicted RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 BAP18Q8IXM2 172 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 FAM9CQ8IZT9 166 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 RPS4Y2Q8TD47 263 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 ASB13Q8WXK3 278 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 MS4A6EQ96DS6 147 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 CMTM5Q96DZ9 223 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 KCTD7Q96MP8 289 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 PLEKHJ1Q9NW61 149 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 PCYT1BQ9Y5K3 369 aaPredicted RBP1.32□□□□□ -2.2
GMDS-206ENST00000530075 CELSR3Q9NYQ7 3312 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 ZNF532Q9HCE3 1301 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 MED13LQ71F56 2210 aa1.32□□□□□ -2.2
GMDS-206ENST00000530075 ACACAQ13085 2346 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 C5orf49A4QMS7 147 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 COCHO43405 550 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 NDUFB2O95178 105 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 MT-CO2P00403 227 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
GMDS-206ENST00000530075 MAP3K7CLP57077 242 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 TAS2R30P59541 319 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 ZNF791Q3KP31 576 aaPredicted RBP1.31□□□□□ -2.2
GMDS-206ENST00000530075 HSP90B2PQ58FF3 399 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 LRRC28Q86X40 367 aaPredicted RBP1.31□□□□□ -2.2
GMDS-206ENST00000530075 DAND5Q8N907 189 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 SLC35G5Q96KT7 338 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 DHRS9Q9BPW9 319 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 TMEM109Q9BVC6 243 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 DERL2Q9GZP9 239 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 HES4Q9HCC6 221 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 DOK5Q9P104 306 aa1.31□□□□□ -2.2
GMDS-206ENST00000530075 TNRC6BQ9UPQ9 1833 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms