RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FBXO7Q9Y3I1 522 aa11.42□□□□□ -0.58
TTC39A-216ENST00000530004 NSD1Q96L73 2696 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-216ENST00000530004 UMAD1C9J7I0 102 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 H3BUX3 64 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 IGHV4-59P01825 116 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 AREGP15514 252 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 RAB5CP51148 216 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 SUB1P53999 127 aaKnown RBP eCLIP11.41□□□□□ -0.58
TTC39A-216ENST00000530004 ARSJQ5FYB0 599 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-216ENST00000530004 Q6ZRG5 221 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 SSMEM1Q8WWF3 244 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 CITED4Q96RK1 184 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-216ENST00000530004 MED9Q9NWA0 146 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-216ENST00000530004 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
TTC39A-216ENST00000530004 CAMLGP49069 296 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 FHITP49789 147 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 FXYD3Q14802 87 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 PXDC1Q5TGL8 231 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 BTNL8Q6UX41 500 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 Q8N9W7 124 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 PARP11Q9NR21 331 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 WDR83OSQ9Y284 106 aa11.41□□□□□ -0.58
TTC39A-216ENST00000530004 TRIM77I1YAP6 450 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 BLOC1S1P78537 153 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 HSD17B13Q7Z5P4 300 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-216ENST00000530004 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 FAM213BQ8TBF2 198 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.58
TTC39A-216ENST00000530004 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 NPCDR1Q9BY65 106 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
TTC39A-216ENST00000530004 BTBD17A6NE02 478 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 CX3CL1P78423 397 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 CD69Q07108 199 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 ZNF616Q08AN1 781 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 ZNF562Q6V9R5 426 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 CENPVQ7Z7K6 275 aaPredicted RBP11.39□□□□□ -0.59
TTC39A-216ENST00000530004 ZNF709Q8N972 641 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 ZNF114Q8NC26 417 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
TTC39A-216ENST00000530004 SRSF8Q9BRL6 282 aaKnown RBP11.39□□□□□ -0.59
TTC39A-216ENST00000530004 HRH4Q9H3N8 390 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 FNDC10F2Z333 226 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 HILS1P60008 231 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 SERF2P84101 59 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 AKR1C1Q04828 323 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 LY6EQ16553 131 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 C19orf35Q6ZS72 473 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 TMEM86BQ8N661 226 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 ARPC1AQ92747 370 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 RASL11BQ9BPW5 248 aa11.39□□□□□ -0.59
TTC39A-216ENST00000530004 FAM103A1Q9BTL3 118 aaKnown RBP11.39□□□□□ -0.59
TTC39A-216ENST00000530004 TEP1Q99973 2627 aaKnown RBP11.38□□□□□ -0.59
TTC39A-216ENST00000530004 A6NDX4 124 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 C17orf112F2Z3M2 114 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 MPDU1O75352 247 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 ELLP55199 621 aaPredicted RBP11.38□□□□□ -0.59
TTC39A-216ENST00000530004 NDPQ00604 133 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 MLANAQ16655 118 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 TMEM219Q86XT9 240 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 DUX5Q96PT3 197 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 TNFRSF19Q9NS68 423 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 PITPNC1Q9UKF7 332 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
TTC39A-216ENST00000530004 F11RQ9Y624 299 aaKnown RBP11.38□□□□□ -0.59
TTC39A-216ENST00000530004 PLXNB1O43157 2135 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 MFSD2BA6NFX1 497 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 HLA-DRB1P01911 266 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 GPX4P36969 197 aaPredicted RBP11.37□□□□□ -0.59
TTC39A-216ENST00000530004 OPRK1P41145 380 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 MFAP2P55001 183 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 PVRIGQ6DKI7 326 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 CACNG8Q8WXS5 425 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
TTC39A-216ENST00000530004 MGST2Q99735 147 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 SLC25A33Q9BSK2 321 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 VSIRQ9H7M9 311 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 LSM4Q9Y4Z0 139 aaKnown RBP11.37□□□□□ -0.59
TTC39A-216ENST00000530004 ZFHX3Q15911 3703 aa11.37□□□□□ -0.59
TTC39A-216ENST00000530004 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 CLDN34H7C241 214 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 S100A1P23297 94 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 GAMTQ14353 236 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 FFAR4Q5NUL3 377 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 DPPA3Q6W0C5 159 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 MARC2Q969Z3 335 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 MISP3Q96FF7 219 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
TTC39A-216ENST00000530004 JMJD8Q96S16 334 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms