RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ENY2Q9NPA8 101 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 PTTG2Q9NZH5 202 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 DUXBA0A1W2PPF3 345 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 I3L2K1 104 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 LGALS9O00182 355 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 VAMP1P23763 118 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 GPR183P32249 361 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 PPP1R1AQ13522 171 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 PVRIGQ6DKI7 326 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 MISP3Q96FF7 219 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 PRR25Q96S07 402 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 C21orf62Q9NYP8 219 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 FLVCR2Q9UPI3 526 aa9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 ZNF256Q9Y2P7 627 aaPredicted RBP9.65□□□□□ -0.86
CCDC90B-216ENST00000529856 SORL1Q92673 2214 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 OR2T8A6NH00 312 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 LYRM1O43325 122 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 TGOLN2O43493 480 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 SPNP16150 400 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 HOXA1P49639 335 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 SMCO1Q147U7 214 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 BSXQ3C1V8 233 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 DEFB121Q5J5C9 76 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 PLET1Q6UQ28 207 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 BSCL2Q96G97 398 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 ZC4H2Q9NQZ6 224 aa9.64□□□□□ -0.87
CCDC90B-216ENST00000529856 A0A1B0GU03 582 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 ZNF320A2RRD8 509 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 LY86O95711 162 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 MT-CO2P00403 227 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 FCGR2BP31994 310 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 MFAP4P55083 255 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 SPSB3Q6PJ21 355 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 ADAMTSL5Q6ZMM2 481 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 PINX1Q96BK5 328 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 TXN2Q99757 166 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 ZNF436Q9C0F3 470 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 HEYLQ9NQ87 328 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 GAR1Q9NY12 217 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 HSPB7Q9UBY9 170 aa9.63□□□□□ -0.87
CCDC90B-216ENST00000529856 IGHV3-35A0A0C4DH35 117 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 CEBPZOSA8MTT3 80 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 CORTO00230 105 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 PITX3O75364 302 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 CTSGP08311 255 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 OR4E1P0C645 316 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 SLC25A6P12236 298 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 FOLR2P14207 255 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 GP9P14770 177 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 ANXA7P20073 488 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 HTR2BP41595 481 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 ZNF846Q147U1 533 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 Q56UQ5 140 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 UBAC2Q8NBM4 344 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 CHRDL1Q9BU40 450 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 TMED3Q9Y3Q3 217 aa9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 LSM4Q9Y4Z0 139 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-216ENST00000529856 A8MWP6 167 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 NXPH3O95157 252 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 IGHV3-48P01763 117 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 TCRBP04435 133 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 EDN2P20800 178 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 CBLN1P23435 193 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 ADMP35318 185 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 TNFRSF9Q07011 255 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 DHRS2Q13268 280 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 DCTN2Q13561 401 aaKnown RBP9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 UNQ9165/PRO28630Q6UXU0 137 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 LYG2Q86SG7 212 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 OR1S1Q8NH92 325 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 WDR12Q9GZL7 423 aaKnown RBP9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 RBKSQ9H477 322 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 PALMDQ9NP74 551 aa9.61□□□□□ -0.87
CCDC90B-216ENST00000529856 TGP01266 2768 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 TMEM213A2RRL7 107 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 NDUFA4O00483 81 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 NUPL2O15504 423 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 HOXB5P09067 269 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 NPBWR1P48145 328 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 MLANAQ16655 118 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 C4orf46Q504U0 113 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 TM4SF20Q53R12 229 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
CCDC90B-216ENST00000529856 DUSP18Q8NEJ0 188 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms