RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 APELAP0DMC3 54 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 FOLR2P14207 255 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 RPA2P15927 270 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 KIR2DS2P43631 304 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 MEOX2P50222 304 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 TPPP2P59282 170 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 SSTP61278 116 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 TSPAN5P62079 268 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 C10orf91Q5T1B1 145 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 MMD2Q8IY49 270 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 SPAG16Q8N0X2 631 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 RPP25LQ8N5L8 163 aaKnown RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 ADAD2Q8NCV1 583 aaKnown RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 TMEM167AQ8TBQ9 72 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 DCUN1D4Q92564 292 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 DLX4Q92988 240 aaPredicted RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 MOB3AQ96BX8 217 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 ABHD1Q96SE0 405 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 TCEAL7Q9BRU2 100 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 ZNF2Q9BSG1 426 aaPredicted RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 TINAGL1Q9GZM7 467 aaPredicted RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 MGAT4CQ9UBM8 478 aa6.48□□□□□ -1.37
SSBP3-212ENST00000528930 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
SSBP3-212ENST00000528930 A0A1B0GW64 132 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 SEC14L6B5MCN3 397 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 LINC01619G3V211 115 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 GABARAPH6UMI1 98 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 SULT1C2O00338 296 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 RBFOX2O43251 390 aaKnown RBP eCLIP6.47□□□□□ -1.37
SSBP3-212ENST00000528930 KBTBD11O94819 623 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 LY6G6CO95867 125 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
SSBP3-212ENST00000528930 IL6RP08887 468 aaPredicted RBP6.47□□□□□ -1.37
SSBP3-212ENST00000528930 OR9G9P0C7N8 305 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 CXCL2P19875 107 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 PI3P19957 117 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 HRH1P35367 487 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 SLURP1P55000 103 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 TAS2R46P59540 309 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 HERV-K104P61576 105 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 SSBP1Q04837 148 aaKnown RBP6.47□□□□□ -1.37
SSBP3-212ENST00000528930 POU2AF1Q16633 256 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 C10orf55Q5SWW7 151 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 TMUB2Q71RG4 321 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 TTC9CQ8N5M4 171 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 OR5H2Q8NGV7 314 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 TM2D3Q9BRN9 247 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 FXYD6Q9H0Q3 95 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 ZNF355PQ9NSJ1 428 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 BET1LQ9NYM9 111 aa6.47□□□□□ -1.37
SSBP3-212ENST00000528930 TRBV9A0A0B4J1U6 114 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 A0A0G2JLM5 398 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 CGB1A6NKQ9 187 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 TEX22C9J3V5 150 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 OVOL1O14753 267 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 CREBL2O60519 120 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-212ENST00000528930 PGLYRP1O75594 196 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-212ENST00000528930 HPRT1P00492 218 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 HRASP01112 189 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 MYOD1P15172 320 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 MAS1LP35410 378 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 TAS2R31P59538 309 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 DEFA5Q01523 94 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 CATR1Q13166 79 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF345Q14585 488 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 OR4A47Q6IF82 309 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 LPCAT3Q6P1A2 487 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 ZNF343Q6P1L6 599 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 GSG1LQ6UXU4 331 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 SSX9Q7RTT3 188 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 SVBPQ8N300 66 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-212ENST00000528930 OR51H1Q8NH63 302 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 OR52I2Q8NH67 350 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 OR1S1Q8NH92 325 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 VSTM2AQ8TAG5 236 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 PHB2Q99623 299 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 SPIN2AQ99865 258 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 SPIN2BQ9BPZ2 258 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 PDCD10Q9BUL8 212 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 NKX6-2Q9C056 277 aaPredicted RBP6.46□□□□□ -1.38
SSBP3-212ENST00000528930 C20orf85Q9H1P6 137 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 KLK11Q9UBX7 282 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 CARHSP1Q9Y2V2 147 aaKnown RBP6.46□□□□□ -1.38
SSBP3-212ENST00000528930 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.38
SSBP3-212ENST00000528930 TRAV6A0A075B6T7 132 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 TRAV3A0A0B4J244 114 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 C13orf42A0A1B0GVH6 325 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 GPR31O00270 319 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 UPK2O00526 184 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 MPPED1O15442 326 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 ACTL6BO94805 426 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 ATG12O94817 140 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 S1PR2O95136 353 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 NDUFB6O95139 128 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 TRBV12-3P01733 135 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 PRH1P02810 166 aa6.45□□□□□ -1.38
SSBP3-212ENST00000528930 RLN1P04808 185 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms