RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
CHEK1-210ENST00000528276 OR2T6Q8NHC8 308 aa11.33□□□□□ -0.6
CHEK1-210ENST00000528276 RAB24Q969Q5 203 aa11.33□□□□□ -0.6
CHEK1-210ENST00000528276 RARRES2Q99969 163 aa11.33□□□□□ -0.6
CHEK1-210ENST00000528276 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 TRAV40A0A0B4J280 105 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 GATA3P23771 443 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 OR10J1P30954 320 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 EBI3Q14213 229 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 MLANAQ16655 118 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 HIF1ANQ9NWT6 349 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 SCO1O75880 301 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 SNAPINO95295 136 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 MT-CO2P00403 227 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 CEBPGP53567 150 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 DEFB113Q30KQ7 82 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 KHDC3LQ587J8 217 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 OR1L6Q8NGR2 347 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 RASL11BQ9BPW5 248 aa11.32□□□□□ -0.6
CHEK1-210ENST00000528276 CARHSP1Q9Y2V2 147 aaKnown RBP11.32□□□□□ -0.6
CHEK1-210ENST00000528276 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
CHEK1-210ENST00000528276 C9JQL5 133 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 RHOBP62745 196 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 NPIPB3Q92617 1050 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 ARPC1AQ92747 370 aa11.31□□□□□ -0.6
CHEK1-210ENST00000528276 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHEK1-210ENST00000528276 YIF1AO95070 293 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 HSPB1P04792 205 aaKnown RBP11.3□□□□□ -0.6
CHEK1-210ENST00000528276 BCL2P10415 239 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 ADCYAP1P18509 176 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 PSMB3P49720 205 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 SOHLH1Q5JUK2 328 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 C10orf91Q5T1B1 145 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 BRD3OSQ6XYD6 125 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 Q8N6K4 173 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 TAGLN2P37802 199 aaKnown RBP11.3□□□□□ -0.6
CHEK1-210ENST00000528276 RND2P52198 227 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 CX3CL1P78423 397 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 RUSC1-AS1Q66K80 236 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 SLC35E3Q7Z769 313 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 LRRC75A-AS1Q8N1F1 130 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 NANPQ8TBE9 248 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 C1orf159Q96HA4 380 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 FAM103A1Q9BTL3 118 aaKnown RBP11.3□□□□□ -0.6
CHEK1-210ENST00000528276 NKX6-2Q9C056 277 aaPredicted RBP11.3□□□□□ -0.6
CHEK1-210ENST00000528276 MANBALQ9NQG1 85 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
CHEK1-210ENST00000528276 LOC102723971A0A1B0GUV8 181 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
CHEK1-210ENST00000528276 PRR20EP86478 221 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 PRR20CP86479 221 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 PRR20DP86480 221 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 PRR20BP86481 221 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 PRR20AP86496 221 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 ICAM4Q14773 271 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 SLC25A33Q9BSK2 321 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
CHEK1-210ENST00000528276 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 ARHGAP32A7KAX9 2087 aa11.29□□□□□ -0.6
CHEK1-210ENST00000528276 SELENOTP62341 195 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 GUCA2BQ16661 112 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 FAM78BQ5VT40 261 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.28□□□□□ -0.6
CHEK1-210ENST00000528276 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 CXorf1O96002 111 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 Q5PR19 223 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
CHEK1-210ENST00000528276 TET2Q6N021 2002 aaPredicted RBP11.27□□□□□ -0.6
CHEK1-210ENST00000528276 LRRK2Q5S007 2527 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 IGHV3-21A0A0B4J1V1 117 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 A0A0U1RQK1 487 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 TGFAP01135 160 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 LINC00869P0C866 280 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 CTRB1P17538 263 aa11.27□□□□□ -0.61
CHEK1-210ENST00000528276 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
CHEK1-210ENST00000528276 MFAP2P55001 183 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms