RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PRR22Q8IZ63 422 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 SLC22A18ASQ8N1D0 253 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 NPWQ8N729 165 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 LRTM2Q8N967 370 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 VN1R2Q8NFZ6 395 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 OR10J6PQ8NGY7 276 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 SCAMP5Q8TAC9 235 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF721Q8TF20 911 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 PPDPFLQ8WWR9 84 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 OR5P2Q8WZ92 322 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 RDH5Q92781 318 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 NEURL3Q96EH8 262 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 ZC2HC1AQ96GY0 325 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 SLC25A44Q96H78 314 aaPredicted RBP3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 PRELID3AQ96N28 172 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 PDCD1LG2Q9BQ51 273 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 PRORYQ9H606 182 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF665Q9H7R5 613 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 ELOVL3Q9HB03 270 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 IDI2-AS1Q9NZ38 188 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 IL36BQ9NZH7 164 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 MSRB1Q9NZV6 116 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 CKLFQ9UBR5 152 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 CES1P1Q9UKY3 287 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 OR2W1Q9Y3N9 320 aa3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 COL4A4P53420 1690 aaPredicted RBP3.01□□□□□ -1.93
CLNS1A-209ENST00000527299 ADAMTSL1Q8N6G6 1762 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 EXPH5Q8NEV8 1989 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 KIAA1549Q9HCM3 1950 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 A0A087WWL8 130 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 TRAV24A0A0B4J272 114 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 A0A0U1RRA0 63 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 MDFIC2A0A1B0GVS7 189 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 RIIAD1A6NNX1 92 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 PTGESO14684 152 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 DNPH1O43598 174 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ANGPTL7O43827 346 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ACTL6BO94805 426 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 PLAUP00749 431 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 HLA-DQA1P01909 254 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 APCSP02743 223 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 CA3P07451 260 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 FGF6P10767 208 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 CBLN1P23435 193 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 CNTFRP26992 372 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 PSMB3P49720 205 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 TIRAPP58753 221 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 HSPE1P61604 102 aaKnown RBP3□□□□□ -1.93
CLNS1A-209ENST00000527299 RPL31P62899 125 aaKnown RBP3□□□□□ -1.93
CLNS1A-209ENST00000527299 MRPS6P82932 125 aaKnown RBP3□□□□□ -1.93
CLNS1A-209ENST00000527299 SERF2P84101 59 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 CXCL9Q07325 125 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 MZT1Q08AG7 82 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF415Q09FC8 603 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF141Q15928 474 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 CEACAM16Q2WEN9 425 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 SPRNQ5BIV9 151 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 NMSQ5H8A3 153 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 TEX36Q5VZQ5 186 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 FRG2Q64ET8 278 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 TXNDC8Q6A555 127 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 DUX4L9Q6RFH8 374 aaPredicted RBP3□□□□□ -1.93
CLNS1A-209ENST00000527299 RASL11AQ6T310 242 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 PARM1Q6UWI2 310 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF841Q6ZN19 808 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 TMEM136Q6ZRR5 245 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 SH2D6Q7Z4S9 175 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 KIR3DL3Q8N743 410 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 OR11H6Q8NGC7 330 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 OR1L8Q8NGR8 309 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 OR51H1Q8NH63 302 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 LMX1AQ8TE12 382 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 SLC37A2Q8TED4 501 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ARPC1AQ92747 370 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 BADQ92934 168 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ST6GALNAC6Q969X2 333 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF501Q96CX3 271 aaPredicted RBP3□□□□□ -1.93
CLNS1A-209ENST00000527299 FRG2BQ96QU4 278 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 MCHR1Q99705 422 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 NAA60Q9H7X0 242 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 TRMT112Q9UI30 125 aaKnown RBP3□□□□□ -1.93
CLNS1A-209ENST00000527299 PRNDQ9UKY0 176 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 OR1A2Q9Y585 309 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 ARL2-SNX15V9GYD0 113 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 HCFC1P51610 2035 aa3□□□□□ -1.93
CLNS1A-209ENST00000527299 MDC1Q14676 2089 aaKnown RBP2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 NCOA6Q14686 2063 aaPredicted RBP2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 A0A0B4J2E0 115 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 LOC107984640A0A0U1RRK4 108 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 A0A1B0GWB2 263 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 A0A1B0GX12 115 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 ZNF840PA6NDX5 716 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 CRYM-AS1A6NIL9 109 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 A8MZ25 164 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 SNURFLB1AK76 121 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 RRHO14718 337 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 KLK10O43240 276 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 HSBP1O75506 76 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 NDUFA7O95182 113 aa2.99□□□□□ -1.93
CLNS1A-209ENST00000527299 KLK1P06870 262 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms