RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 DUX3Q96PT4 197 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 SRSF8Q9BRL6 282 aaKnown RBP8.36□□□□□ -1.07
NEDD8-204ENST00000526430 GON7Q9BXV9 100 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.36□□□□□ -1.07
NEDD8-204ENST00000526430 TMED3Q9Y3Q3 217 aa8.36□□□□□ -1.07
NEDD8-204ENST00000526430 A0A1B0GU03 582 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 ACTL6BO94805 426 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 ATG12O94817 140 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 NDUFB8O95169 186 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 REG1AP05451 166 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 CDX1P47902 265 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-204ENST00000526430 SLC35B1P78383 322 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 DEFA5Q01523 94 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 BSXQ3C1V8 233 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 C12orf45Q8N5I9 185 aaPredicted RBP8.35□□□□□ -1.07
NEDD8-204ENST00000526430 OR4D5Q8NGN0 318 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 ABHD5Q8WTS1 349 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 GNB4Q9HAV0 340 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 FKBP11Q9NYL4 201 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 HSPB7Q9UBY9 170 aa8.35□□□□□ -1.07
NEDD8-204ENST00000526430 IGLV11-55A0A075B6I3 123 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 H3BUA1 57 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 I3L521 148 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 CCSO14618 274 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 NXPH3O95157 252 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 OR13C7P0DN81 318 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 SPCS3P61009 180 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 COQ8AQ8NI60 647 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 PHB2Q99623 299 aa8.34□□□□□ -1.07
NEDD8-204ENST00000526430 TMEM50AO95807 157 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 RNASE2P10153 161 aaKnown RBP8.33□□□□□ -1.08
NEDD8-204ENST00000526430 PAX9P55771 341 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 FHL3Q13643 280 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 THOC7Q6I9Y2 204 aaKnown RBP8.33□□□□□ -1.08
NEDD8-204ENST00000526430 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 SPATA25Q9BR10 227 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 HINT2Q9BX68 163 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 RBKSQ9H477 322 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 ABCA13Q86UQ4 5058 aa8.33□□□□□ -1.08
NEDD8-204ENST00000526430 A8MZ25 164 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 F8W735 103 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-204ENST00000526430 PRAF2O60831 178 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 OR2J3O76001 311 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 SIX6O95475 246 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 TRGV3P03979 118 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 RUNX1Q01196 453 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 TNFRSF9Q07011 255 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 MLANAQ16655 118 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 TATDN3Q17R31 274 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-204ENST00000526430 ZBTB8BQ8NAP8 495 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-204ENST00000526430 SLA2Q9H6Q3 261 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 F11RQ9Y624 299 aaKnown RBP8.32□□□□□ -1.08
NEDD8-204ENST00000526430 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
NEDD8-204ENST00000526430 I3L2K1 104 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 K7EIM0 57 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 DHFRP00374 187 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 IFNA17P01571 189 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 TRBV12-3P01733 135 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 IGHV3-11P01762 117 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 TPPP2P59282 170 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 RHOGP84095 191 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 RGS21Q2M5E4 152 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 IAH1Q2TAA2 248 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-204ENST00000526430 DEFB136Q30KP8 78 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 OR1P1Q8NH06 330 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 RNASE11Q8TAA1 199 aaKnown RBP8.31□□□□□ -1.08
NEDD8-204ENST00000526430 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 OR5B12Q96R08 314 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 MRPL36Q9P0J6 103 aaKnown RBP8.31□□□□□ -1.08
NEDD8-204ENST00000526430 FBXL7Q9UJT9 491 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 S4R3C0 116 aa8.31□□□□□ -1.08
NEDD8-204ENST00000526430 MFSD2BA6NFX1 497 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 MBPP02686 304 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-204ENST00000526430 GP9P14770 177 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 H2BFSP57053 126 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEDD8-204ENST00000526430 TMEM65Q6PI78 240 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 UXS1Q8NBZ7 420 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 NECAP1Q8NC96 275 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 C2orf50Q96LR7 162 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 FNDC4Q9H6D8 234 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-204ENST00000526430 PLEKHA3Q9HB20 300 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 GPN1Q9HCN4 374 aaPredicted RBP8.3□□□□□ -1.08
NEDD8-204ENST00000526430 ZNF355PQ9NSJ1 428 aa8.3□□□□□ -1.08
NEDD8-204ENST00000526430 C19orf73Q9NVV2 129 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms