RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SP6Q3SY56 376 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 TM4SF20Q53R12 229 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 Q56UQ5 140 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 SLC16A13Q7RTY0 426 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 SLC35G3Q8N808 338 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 OR51S1Q8NGJ8 323 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 CACNG8Q8WXS5 425 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 MISP3Q96FF7 219 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 MLXQ9UH92 298 aa13.89□□□□□ -0.19
TSPAN4-216ENST00000526055 CRYM-AS1A6NIL9 109 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 K7EMT4 169 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 CORTO00230 105 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 NUPL2O15504 423 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 ST8SIA3O43173 380 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 IFNA17P01571 189 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 EDN2P20800 178 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 IZUMO4Q1ZYL8 232 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 PYDC2Q56P42 97 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 TMEM61Q8N0U2 210 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 GLYATL2Q8WU03 294 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 RBPMSQ93062 196 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 WDR89Q96FK6 387 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 CACFD1Q9UGQ2 172 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 V9GYH0 126 aa13.88□□□□□ -0.19
TSPAN4-216ENST00000526055 STAB2Q8WWQ8 2551 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 KMT2CQ8NEZ4 4911 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 IGHV3-21A0A0B4J1V1 117 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 IGHV3-35A0A0C4DH35 117 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 CTSGP08311 255 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 ADMP35318 185 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 FAUP35544 74 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 SNCAP37840 140 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 SUB1P53999 127 aaKnown RBP eCLIP13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 AP3S2P59780 193 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 PVRIGQ6DKI7 326 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 BTNL8Q6UX41 500 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 LINC00299Q6ZSB3 139 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 UBAC2Q8NBM4 344 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 OR52E5Q8NH55 327 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 DEDD2Q8WXF8 326 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 SPATA25Q9BR10 227 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 ENY2Q9NPA8 101 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 KCNIP3Q9Y2W7 256 aa13.87□□□□□ -0.19
TSPAN4-216ENST00000526055 C15orf62A8K5M9 175 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 C3orf84H3BNL1 204 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 MT-CO2P00403 227 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 CD7P09564 240 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 HAGHQ16775 308 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 LINC00322Q6ZN03 302 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 RBPMS2Q6ZRY4 209 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 IL22RA2Q969J5 263 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 GALNT14Q96FL9 552 aa13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-216ENST00000526055 HUWE1Q7Z6Z7 4374 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 OR11H12B2RN74 326 aa13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 HOXA1P49639 335 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 SPCS3P61009 180 aa13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 CNPY1Q3B7I2 92 aa13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 TMEM56-RWDD3S4R434 201 aa13.85□□□□□ -0.19
TSPAN4-216ENST00000526055 PIGBOS1A0A0B4J2F0 54 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 A0A0G2JRQ6 117 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 NPBWR1P48145 328 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 ZNF79Q15937 498 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 LAMTOR1Q6IAA8 161 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 SELENOHQ8IZQ5 122 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 DUSP18Q8NEJ0 188 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 OR52B4Q8NGK2 314 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 PINX1Q96BK5 328 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 CITED4Q96RK1 184 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 MCUBQ9NWR8 336 aa13.84□□□□□ -0.19
TSPAN4-216ENST00000526055 TSPAN4O14817 238 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 GNG7O60262 68 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 BSXQ3C1V8 233 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 TMEM268Q5VZI3 342 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 Q6ZRM9 215 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 LHFPL5Q8TAF8 219 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 OR10C1Q96KK4 312 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 SRD5A3Q9H8P0 318 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 PTTG2Q9NZH5 202 aa13.83□□□□□ -0.2
TSPAN4-216ENST00000526055 SCAF4O95104 1147 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 RNASE2P10153 161 aaKnown RBP13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 SRPXP78539 464 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 KLF9Q13886 244 aaPredicted RBP13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 TMEM187Q14656 261 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 TOMM5Q8N4H5 51 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 DEFB125Q8N687 156 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 TRIM63Q969Q1 353 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 TMEM230Q96A57 120 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 SRRQ9GZT4 340 aa13.82□□□□□ -0.2
TSPAN4-216ENST00000526055 SCGB2A1O75556 95 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 ANXA3P12429 323 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 HTR2BP41595 481 aa13.81□□□□□ -0.2
TSPAN4-216ENST00000526055 INPP1P49441 399 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms