RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 TUBA4BQ9H853 241 aa9.68□□□□□ -0.86
TRAPPC4-205ENST00000525079 PALMDQ9NP74 551 aa9.68□□□□□ -0.86
TRAPPC4-205ENST00000525079 SCP2D1Q9UJQ7 156 aa9.68□□□□□ -0.86
TRAPPC4-205ENST00000525079 UFC1Q9Y3C8 167 aa9.68□□□□□ -0.86
TRAPPC4-205ENST00000525079 V9GYH0 126 aa9.68□□□□□ -0.86
TRAPPC4-205ENST00000525079 B3GALNT1O75752 331 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 SCAF4O95104 1147 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 S100A5P33763 92 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 SNCAP37840 140 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 HOXA1P49639 335 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 MFAP4P55083 255 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 DHODHQ02127 395 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 TMEM268Q5VZI3 342 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 DEFB125Q8N687 156 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 ZNF114Q8NC26 417 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 TMEM190Q8WZ59 177 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 TMEM230Q96A57 120 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 GPR146Q96CH1 333 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 RCHY1Q96PM5 261 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 WFDC10AQ9H1F0 79 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 SLC2A8Q9NY64 477 aa9.67□□□□□ -0.86
TRAPPC4-205ENST00000525079 A8MZ25 164 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 CTSGP08311 255 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 C8orf88P0DMB2 117 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 AKR1C4P17516 323 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 KLF9Q13886 244 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 ZNF79Q15937 498 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 CCDC190Q86UF4 302 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 TOMM5Q8N4H5 51 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 RBPMSQ93062 196 aaKnown RBP9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 TRIM63Q969Q1 353 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 ENY2Q9NPA8 101 aa9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 MRPL27Q9P0M9 148 aaKnown RBP9.66□□□□□ -0.86
TRAPPC4-205ENST00000525079 OR11H12B2RN74 326 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 NDUFA4O00483 81 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 NXPH3O95157 252 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 RNASE2P10153 161 aaKnown RBP9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 ELLP55199 621 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 TMEM187Q14656 261 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 HAGHQ16775 308 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 MARC2Q969Z3 335 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 SCGB3A2Q96PL1 93 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 ATP6V0BQ99437 205 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 CACNG5Q9UF02 275 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 KCNIP3Q9Y2W7 256 aa9.65□□□□□ -0.86
TRAPPC4-205ENST00000525079 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 INS-IGF2F8WCM5 200 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 ZNF701M0R085 212 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 GNG7O60262 68 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 YIF1AO95070 293 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 FAUP35544 74 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 SPCS3P61009 180 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 MLANAQ16655 118 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 RBPMS2Q6ZRY4 209 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 TMED4Q7Z7H5 227 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 FAM219AQ8IW50 185 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 OR52B4Q8NGK2 314 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 TXN2Q99757 166 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 DAZ1Q9NQZ3 744 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 GAR1Q9NY12 217 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
TRAPPC4-205ENST00000525079 SUB1P53999 127 aaKnown RBP eCLIP9.63□□□□□ -0.872e-9■■■■■ 55.6
TRAPPC4-205ENST00000525079 AP3S2P59780 193 aa9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 SUPT4H1P63272 117 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 RELQ04864 619 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 SLC16A13Q7RTY0 426 aa9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 LYZL2Q7Z4W2 148 aa9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 DUSP18Q8NEJ0 188 aa9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 SRD5A3Q9H8P0 318 aa9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 HEYLQ9NQ87 328 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-205ENST00000525079 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 CEBPZOSA8MTT3 80 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 K7EMT4 169 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 FCGR2BP31994 310 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 SPANXN2Q5MJ10 180 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 PVRIGQ6DKI7 326 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 OR52E5Q8NH55 327 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 SRRQ9GZT4 340 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 FNDC4Q9H6D8 234 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 RETNQ9HD89 108 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 MRPL36Q9P0J6 103 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 SMPXQ9UHP9 88 aa9.62□□□□□ -0.87
TRAPPC4-205ENST00000525079 IGHV3OR16-13A0A075B7E8 117 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 IGHV3-74A0A0B4J1X5 117 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 TRAV25A0A0B4J276 109 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 C15orf62A8K5M9 175 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 TMEM50AO95807 157 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
TRAPPC4-205ENST00000525079 OPRK1P41145 380 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms