RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 RNASEH2CQ8TDP1 164 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 PINX1Q96BK5 328 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 AQP10Q96PS8 301 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 THYN1Q9P016 225 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 IGLV11-55A0A075B6I3 123 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 H3BUA1 57 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 PF4V1P10720 104 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 ACOT7LQ6ZUV0 252 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 TMEM217Q8N7C4 229 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 OR10P1Q8NGE3 313 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 MS4A10Q96PG2 267 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 MFFQ9GZY8 342 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 DMRT1Q9Y5R6 373 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 NF1P21359 2839 aa12.39□□□□□ -0.43
TSPAN4-213ENST00000524895 RNF222A6NCQ9 220 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 OR2J3O76001 311 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 IGLV1-40P01703 118 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 IGHG4P01861 327 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 TRGV3P03979 118 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 OPRK1P41145 380 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 TPPP2P59282 170 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 HBG1P69891 147 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 HBG2P69892 147 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 EXOSC2Q13868 293 aaKnown RBP12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 PVRIGQ6DKI7 326 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 KLHDC1Q8N7A1 406 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 SLA2Q9H6Q3 261 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 HSPB11Q9Y547 144 aa12.38□□□□□ -0.43
TSPAN4-213ENST00000524895 RPS10-NUDT3A0A1W2PQS6 291 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 TMEM89A2RUT3 159 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 CLPSL1A2RUU4 121 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 BOLA2-SMG1P6H3BVE0 249 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 BRI3O95415 125 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 EIF2B2P49770 351 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 RHOGP84095 191 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 DEFA5Q01523 94 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 NHLH2Q02577 135 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 SLC38A11Q08AI6 406 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 OR2F1Q13607 317 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 HAPLN4Q86UW8 402 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 LILRB2Q8N423 598 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 NECAP1Q8NC96 275 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 OR1S2Q8NGQ3 325 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 FBXL7Q9UJT9 491 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 RNF114Q9Y508 228 aa12.37□□□□□ -0.43
TSPAN4-213ENST00000524895 TRBV9A0A0B4J1U6 114 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 FAM223BA6NKX1 122 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 PRSS46E5RG02 174 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 MT-CO2P00403 227 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 ELANEP08246 267 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 MDKP21741 143 aaPredicted RBP12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 PSMB8P28062 276 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 S100A11P31949 105 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 CD69Q07108 199 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 ARL16Q0P5N6 197 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 FOXE3Q13461 319 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 ZNF345Q14585 488 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 KLK9Q2XQG4 91 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 ETFRF1Q6IPR1 90 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 SLC16A13Q7RTY0 426 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 FAM223AQ8IWN6 122 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 COMMD1Q8N668 190 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 PPP1R14BQ96C90 147 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 SMIM3Q9BZL3 60 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 KLK9Q9UKQ9 250 aa12.36□□□□□ -0.43
TSPAN4-213ENST00000524895 IGHV3-21A0A0B4J1V1 117 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 K7EIM0 57 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 HAX1O00165 279 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 NDUFB8O95169 186 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 CXCL2P19875 107 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 RAB9AP51151 201 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 NKX2-5P52952 324 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 DLK1P80370 383 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 CLINT1Q14677 625 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 C15orf32Q32M92 178 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 LCNL1Q6ZST4 164 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 PRIMA1Q86XR5 153 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 OR5AU1Q8NGC0 362 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 OR4X2Q8NGF9 303 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 BSCL2Q96G97 398 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 FBXL17Q9UF56 701 aa12.35□□□□□ -0.43
TSPAN4-213ENST00000524895 A0A0D9SG52 128 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 SMCO3A2RU48 225 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 I3L2K1 104 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 IGHV3-48P01763 117 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 ATP5G2Q06055 141 aa12.34□□□□□ -0.43
TSPAN4-213ENST00000524895 FOXL1Q12952 345 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms