RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SLC45A2Q9UMX9 530 aa10.78□□□□□ -0.68
CAPN1-202ENST00000524773 C20orf202A1L168 122 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 PRSS47A8MTI9 375 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 MMP23AO75900 390 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 LINC00614P0C842 121 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 CECR9P0C854 216 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 MFAP2P55001 183 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 LOXL3P58215 753 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 GNG5P63218 68 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 CT45A1Q5HYN5 189 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 CT45A3Q8NHU0 189 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 ZPBPQ9BS86 351 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 ENY2Q9NPA8 101 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 SLC35D1Q9NTN3 355 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 UQCR10Q9UDW1 63 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 EP300Q09472 2414 aaPredicted RBP10.77□□□□□ -0.68
CAPN1-202ENST00000524773 POLEQ07864 2286 aa10.77□□□□□ -0.68
CAPN1-202ENST00000524773 TPRP12270 2363 aaKnown RBP10.77□□□□□ -0.69
CAPN1-202ENST00000524773 SRRM4A7MD48 611 aaKnown RBP10.77□□□□□ -0.69
CAPN1-202ENST00000524773 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-202ENST00000524773 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-202ENST00000524773 GABRA6Q16445 453 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 TRAT1Q6PIZ9 186 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 ZNF439Q8NDP4 499 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 GVINP1Q7Z2Y8 2422 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 PRR20EP86478 221 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 PRR20CP86479 221 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 PRR20DP86480 221 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 PRR20BP86481 221 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 PRR20AP86496 221 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 FAM90A1Q86YD7 464 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 C18orf32Q8TCD1 76 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 IL19Q9UHD0 177 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 OR51B2Q9Y5P1 312 aa10.77□□□□□ -0.69
CAPN1-202ENST00000524773 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-202ENST00000524773 C15orf61A6NNL5 157 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 C9JCJ5 164 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 J3QW42 95 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 APELAP0DMC3 54 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 PRRX1P54821 245 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 TMEM249Q2WGJ8 235 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 MOGAT3Q86VF5 341 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 C11orf52Q96A22 123 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 IDI2-AS1Q9NZ38 188 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 DSCAMO60469 2012 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 PKDREJQ9NTG1 2253 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 LOC102724200A0A096LPH7 203 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-202ENST00000524773 SPRY3O43610 288 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 TSPOP30536 169 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 REG1BP48304 166 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 SRSF6Q13247 344 aaKnown RBP10.76□□□□□ -0.69
CAPN1-202ENST00000524773 ABI3Q9P2A4 366 aa10.76□□□□□ -0.69
CAPN1-202ENST00000524773 KLF13Q9Y2Y9 288 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-202ENST00000524773 J3QR06 171 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 MT-CO2P00403 227 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 AMY1AP04745 511 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 AREGP15514 252 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 NEUROG1Q92886 237 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 ASCL2Q99929 193 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 E7EUB6 86 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 M0R2Z0 102 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-202ENST00000524773 ADH4P08319 380 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 CD59P13987 128 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 IGLL1P15814 213 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 TMPRSS3P57727 454 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 HSPE1P61604 102 aaKnown RBP10.75□□□□□ -0.69
CAPN1-202ENST00000524773 RAB31Q13636 194 aa10.75□□□□□ -0.69
CAPN1-202ENST00000524773 VWC2LB2RUY7 222 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 HSBP1O75506 76 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 STUMQ69YW2 141 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 ETFRF1Q6IPR1 90 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 Q71RC1 249 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-202ENST00000524773 OR2D3Q8NGH3 330 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 PMCHL2Q9BQD1 86 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-202ENST00000524773 CALYQ9NYX4 217 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 TOX4O94842 621 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 ZNF138P52744 262 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 GCSAMQ8N6F7 178 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 WDR31Q8NA23 367 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 ASCL3Q9NQ33 180 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 KLRC4-KLRK1H3BQV0 150 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 HOXC12P31275 282 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 TCTAP57738 103 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 UBE2L3P68036 154 aaKnown RBP10.74□□□□□ -0.69
CAPN1-202ENST00000524773 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 C19orf35Q6ZS72 473 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 TCF24Q7RTU0 167 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 BLNKQ8WV28 456 aa10.74□□□□□ -0.69
CAPN1-202ENST00000524773 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 ISLRO14498 428 aa10.73□□□□□ -0.69
CAPN1-202ENST00000524773 TNFSF15O95150 251 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms