RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	CCR7	P32248	378 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	INPP1	P49441	399 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	SULT1A1	P50225	295 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	SULT1A2	P50226	295 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	GDI2	P50395	445 aa	Known RBP	2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	OR4D2	P58180	307 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	KRTAP10-1	P60331	282 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	NAA20	P61599	178 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	SLC35A2	P78381	396 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	SLC9A3R2	Q15599	337 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	TMEM241	Q24JQ0	296 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	MEST	Q5EB52	335 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655		Q5W150	140 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	ELP2	Q6IA86	826 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	SFXN4	Q6P4A7	337 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655		Q6ZR03	302 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655		Q6ZRU5	148 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	STX12	Q86Y82	276 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	OR2K2	Q8NGT1	345 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	OR52N1	Q8NH53	320 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	ZNRF2	Q8NHG8	242 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	DGCR14	Q96DF8	476 aa	Known RBP	2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	NDFIP1	Q9BT67	221 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	TLNRD1	Q9H1K6	362 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	ENOPH1	Q9UHY7	261 aa		2.93	□□□□□ -1.94
SREK1-213	ENST00000523655	HSPG2	P98160	4391 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	TGIF2-C20orf24	A0A0A6YYL0	155 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	IGHV1-3	A0A0C4DH29	117 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	RBFOX2	O43251	390 aa	Known RBP eCLIP	2.92	□□□□□ -1.94	1e-7	■□□□□ 11.2
SREK1-213	ENST00000523655	CRYBA1	P05813	215 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	GTF2F2	P13984	249 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	IL1RN	P18510	177 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	PRPS1L1	P21108	318 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	ZNF83	P51522	516 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	RAB5B	P61020	215 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	HPCA	P84074	193 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	EBP	Q15125	230 aa	Known RBP	2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	SP6	Q3SY56	376 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	TTMP	Q5BVD1	217 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	ZNF678	Q5SXM1	525 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	OR10K2	Q6IF99	312 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	LINC01551	Q86U37	167 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	NAA40	Q86UY6	237 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	ZNF101	Q8IZC7	436 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	UMODL1-AS1	Q8N2C9	162 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	OR7D2	Q96RA2	312 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	TMEM38B	Q9NVV0	291 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	DNAH11	Q96DT5	4516 aa		2.92	□□□□□ -1.94
SREK1-213	ENST00000523655	GMNC	A6NCL1	334 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	DPRX	A6NFQ7	191 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	CLDN24	A6NM45	220 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	COPE	O14579	308 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	CXorf1	O96002	111 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	REG1A	P05451	166 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MSMB	P08118	114 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	DDT	P30046	118 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	PEBP1	P30086	187 aa	Known RBP	2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MPI	P34949	423 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	REG1B	P48304	166 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	SERPINB9	P50453	376 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MAX	P61244	160 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	BSPH1	Q075Z2	132 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	RSU1	Q15404	277 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	TRMT12	Q53H54	448 aa	Known RBP	2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MRPL2	Q5T653	305 aa	Known RBP	2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	FAM104B	Q5XKR9	115 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	LCN8	Q6JVE9	175 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	CYHR1	Q6ZMK1	362 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	NEGR1	Q7Z3B1	354 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	DPPA2	Q7Z7J5	298 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	SLC51B	Q86UW2	128 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MKX	Q8IYA7	352 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	LRRC25	Q8N386	305 aa	Predicted RBP	2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	NATD1	Q8N6N6	113 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	CLDN22	Q8N7P3	220 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	CYB561D1	Q8N8Q1	229 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	PLPP5	Q8NEB5	264 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	OR9I1	Q8NGQ6	314 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	OR51H1	Q8NH63	302 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	OR2V1	Q8NHB1	315 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MFSD8	Q8NHS3	518 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MARVELD1	Q9BSK0	173 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	GNB1L	Q9BYB4	327 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	VPS29	Q9UBQ0	182 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	LINC00527	Q9UJ94	153 aa		2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	LSM5	Q9Y4Y9	91 aa	Known RBP	2.91	□□□□□ -1.94
SREK1-213	ENST00000523655	MED12L	Q86YW9	2145 aa		2.9	□□□□□ -1.94
SREK1-213	ENST00000523655	KMT2A	Q03164	3969 aa		2.9	□□□□□ -1.94
SREK1-213	ENST00000523655	SCN3A	Q9NY46	2000 aa		2.9	□□□□□ -1.94
SREK1-213	ENST00000523655	NUP214	P35658	2090 aa	Predicted RBP	2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	SMIM9	A6NGZ8	99 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655		E7EQL1	145 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655		F5H5P2	479 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	RGS5	O15539	181 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	OR2J2	O76002	312 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	SERPINA1	P01009	418 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	CRH	P06850	196 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	OR4A8	P0C604	315 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	CCL3	P10147	92 aa		2.9	□□□□□ -1.95
SREK1-213	ENST00000523655	PSMB3	P49720	205 aa		2.9	□□□□□ -1.95

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