RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 TFPI2P48307 235 aa8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 RND3P61587 244 aa8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 EWSR1Q01844 656 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 PMS2P11Q13670 270 aa8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 MZT2AQ6P582 158 aa8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 PINX1Q96BK5 328 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-237ENST00000523275 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 A0A0B4J293 547 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 NUPR2A6NF83 97 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 FAM25AB3EWG3 89 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 FAM25CB3EWG5 89 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 FAM25GB3EWG6 89 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 ATG12O94817 140 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 IGKV1-5P01602 117 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 CD5P06127 495 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 PI3P19957 117 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 SNCAP37840 140 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 NPBWR1P48145 328 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 PIGPP57054 158 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 IZUMO4Q1ZYL8 232 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 SPINK9Q5DT21 86 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 RNASE10Q5GAN6 216 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 FAM90A2PQ658T7 463 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 CEMP1Q6PRD7 247 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 TMEM217Q8N7C4 229 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 DUSP18Q8NEJ0 188 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 LINC00476Q8WZB0 136 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 GINS3Q9BRX5 216 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 CSTL1Q9H114 145 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 KLK11Q9UBX7 282 aa8.68□□□□□ -1.02
CTNNA1-237ENST00000523275 IGKV3-7A0A075B6H7 116 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 LY6G6CO95867 125 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 IFNA17P01571 189 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 CD3DP04234 171 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 TBPP20226 339 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 AKR1C2P52895 323 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 PAFAH1B2P68402 229 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 RNASE12Q5GAN4 147 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 LHFPL1Q86WI0 220 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 GBGT1Q8N5D6 347 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 ARRDC1Q8N5I2 433 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 OR52I2Q8NH67 350 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 AP3S1Q92572 193 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 TP53RKQ96S44 253 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 MTFP1Q9UDX5 166 aa8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-237ENST00000523275 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 MPTX1A8MV57 137 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 INS-IGF2F8WCM5 200 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 ST8SIA3O43173 380 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 TMEM50AO95807 157 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 P0C879 139 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 ZNF182P17025 639 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 ETV6P41212 452 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 SUB1P53999 127 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 ZNF124Q15973 351 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 CTF1Q16619 201 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 PVRIGQ6DKI7 326 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 SLC35G3Q8N808 338 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 TERB2Q8NHR7 220 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 ZFAND1Q8TCF1 268 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 C15orf40Q8WUR7 153 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 ABHD1Q96SE0 405 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 PDCD10Q9BUL8 212 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 COPZ2Q9P299 210 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 EXTL2Q9UBQ6 330 aa8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 KLK5Q9Y337 293 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-237ENST00000523275 DNASE2O00115 360 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 CORTO00230 105 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 TRIM16LQ309B1 348 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 SP6Q3SY56 376 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 ZNF600Q6ZNG1 722 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 LILRB2Q8N423 598 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 CCDC71LQ8N9Z2 235 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 GATAD1Q8WUU5 269 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 ST8SIA2Q92186 375 aa8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 RRNAD1Q96FB5 475 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 NAA50Q9GZZ1 169 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 PUS1Q9Y606 427 aaKnown RBP eCLIP8.65□□□□□ -1.02
CTNNA1-237ENST00000523275 A0A1B0GU03 582 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 DFFBO76075 338 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 GABARAPO95166 117 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 RAB3DO95716 219 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 CD74P04233 296 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 HOXA1P49639 335 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 PPP5CP53041 499 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 RPL11P62913 178 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 SCGB2B2Q4G0G5 96 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 OR4D10Q8NGI6 311 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 OR13C8Q8NGS7 320 aa8.64□□□□□ -1.03
CTNNA1-237ENST00000523275 RARRES2Q99969 163 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms