RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TRAV14DV4A0A0A6YYC5 116 aa14.49□□□□□ -0.09
PABPC1-215ENST00000520804 M0QYG6 137 aa14.49□□□□□ -0.09
PABPC1-215ENST00000520804 GNG7O60262 68 aa14.49□□□□□ -0.09
PABPC1-215ENST00000520804 CMC4P56277 68 aaPredicted RBP14.49□□□□□ -0.09
PABPC1-215ENST00000520804 FAM90A2PQ658T7 463 aa14.49□□□□□ -0.09
PABPC1-215ENST00000520804 LY6G6CO95867 125 aa14.48□□□□□ -0.09
PABPC1-215ENST00000520804 TFPI2P48307 235 aa14.48□□□□□ -0.09
PABPC1-215ENST00000520804 RND3P61587 244 aa14.48□□□□□ -0.09
PABPC1-215ENST00000520804 ZNF124Q15973 351 aa14.48□□□□□ -0.09
PABPC1-215ENST00000520804 IZUMO4Q1ZYL8 232 aa14.48□□□□□ -0.09
PABPC1-215ENST00000520804 TMEM217Q8N7C4 229 aa14.48□□□□□ -0.09
PABPC1-215ENST00000520804 IGKV3-7A0A075B6H7 116 aa14.47□□□□□ -0.09
PABPC1-215ENST00000520804 RORCP51449 518 aa14.47□□□□□ -0.09
PABPC1-215ENST00000520804 SPINK9Q5DT21 86 aa14.47□□□□□ -0.09
PABPC1-215ENST00000520804 LHFPL1Q86WI0 220 aa14.47□□□□□ -0.09
PABPC1-215ENST00000520804 ZNF486Q96H40 463 aaPredicted RBP14.47□□□□□ -0.09
PABPC1-215ENST00000520804 GINS3Q9BRX5 216 aa14.47□□□□□ -0.09
PABPC1-215ENST00000520804 CSTL1Q9H114 145 aa14.47□□□□□ -0.09
PABPC1-215ENST00000520804 IGHV3OR16-13A0A075B7E8 117 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 IGHV3-74A0A0B4J1X5 117 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 INS-IGF2F8WCM5 200 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 IGKV1-5P01602 117 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 PGAM2P15259 253 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 PI3P19957 117 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 PIGPP57054 158 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 RNASE10Q5GAN6 216 aaKnown RBP14.46□□□□□ -0.09
PABPC1-215ENST00000520804 TOMM20LQ6UXN7 152 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 DUSP18Q8NEJ0 188 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 KLK11Q9UBX7 282 aa14.46□□□□□ -0.09
PABPC1-215ENST00000520804 KLK5Q9Y337 293 aaPredicted RBP14.46□□□□□ -0.09
PABPC1-215ENST00000520804 MPTX1A8MV57 137 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 FAM25AB3EWG3 89 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 FAM25CB3EWG5 89 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 FAM25GB3EWG6 89 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 CD5P06127 495 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 P0C879 139 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 NPBWR1P48145 328 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 PAFAH1B2P68402 229 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 RNASE12Q5GAN4 147 aaKnown RBP14.45□□□□□ -0.1
PABPC1-215ENST00000520804 MZT2AQ6P582 158 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 TCF24Q7RTU0 167 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 GBGT1Q8N5D6 347 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 TP53RKQ96S44 253 aa14.45□□□□□ -0.1
PABPC1-215ENST00000520804 A0A0B4J293 547 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 ST8SIA3O43173 380 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 CD3DP04234 171 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 SNCAP37840 140 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 AKR1C2P52895 323 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 PVRIGQ6DKI7 326 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 ZNF600Q6ZNG1 722 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 ARRDC1Q8N5I2 433 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 SLC35G3Q8N808 338 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 GATAD1Q8WUU5 269 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 ST8SIA2Q92186 375 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 VSIRQ9H7M9 311 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 ZFAND3Q9H8U3 227 aa14.44□□□□□ -0.1
PABPC1-215ENST00000520804 C3orf85A0A1B0GTC6 90 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 ATG12O94817 140 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 IFNA17P01571 189 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 APOHP02749 345 aaPredicted RBP14.43□□□□□ -0.1
PABPC1-215ENST00000520804 LILRB2Q8N423 598 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 OR52I2Q8NH67 350 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 AP3S1Q92572 193 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 MTFP1Q9UDX5 166 aa14.43□□□□□ -0.1
PABPC1-215ENST00000520804 PUS1Q9Y606 427 aaKnown RBP eCLIP14.43□□□□□ -0.1
PABPC1-215ENST00000520804 CORTO00230 105 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 TMEM50AO95807 157 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 TBPP20226 339 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 PHLDA1Q8WV24 401 aaPredicted RBP14.42□□□□□ -0.1
PABPC1-215ENST00000520804 RARRES2Q99969 163 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 PDCD10Q9BUL8 212 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 MS4A6AQ9H2W1 248 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 EXTL2Q9UBQ6 330 aa14.42□□□□□ -0.1
PABPC1-215ENST00000520804 A0A1B0GU03 582 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 DFFBO76075 338 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 RNASE2P10153 161 aaKnown RBP14.41□□□□□ -0.1
PABPC1-215ENST00000520804 ETV6P41212 452 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 PPP5CP53041 499 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 SUB1P53999 127 aaKnown RBP eCLIP14.41□□□□□ -0.1
PABPC1-215ENST00000520804 TRIM16LQ309B1 348 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 ABHD1Q96SE0 405 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 COPZ2Q9P299 210 aa14.41□□□□□ -0.1
PABPC1-215ENST00000520804 TRAV2A0A0B4J234 112 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 IGHV3-66A0A0C4DH42 116 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 GABARAPO95166 117 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 ZNF182P17025 639 aaPredicted RBP14.4□□□□□ -0.1
PABPC1-215ENST00000520804 UCP1P25874 307 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 CTF1Q16619 201 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 SP6Q3SY56 376 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 CCDC71LQ8N9Z2 235 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 OR4D10Q8NGI6 311 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 OR11H2Q8NH07 326 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 TERB2Q8NHR7 220 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 ZFAND1Q8TCF1 268 aa14.4□□□□□ -0.1
PABPC1-215ENST00000520804 NAA50Q9GZZ1 169 aaKnown RBP14.4□□□□□ -0.1
PABPC1-215ENST00000520804 KMT2AQ03164 3969 aa14.39□□□□□ -0.11
PABPC1-215ENST00000520804 DNASE2O00115 360 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-215ENST00000520804 CD74P04233 296 aa14.39□□□□□ -0.11
PABPC1-215ENST00000520804 HOXA1P49639 335 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-215ENST00000520804 DEFB131AP59861 70 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms