RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SCCPDHQ8NBX0 429 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 IL36GQ9NZH8 169 aa8.41□□□□□ -1.06
PDGFRB-207ENST00000520579 VENTXO95231 258 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 CELA3BP08861 270 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 FGF12P61328 243 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 SRSF6Q13247 344 aaKnown RBP8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 DAZAP2Q15038 168 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 TIGITQ495A1 244 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 RHBDD2Q6NTF9 364 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 NEUROG1Q92886 237 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 MS4A5Q9H3V2 200 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 AKAP6Q13023 2319 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 ANKRD30BLA7E2S9 258 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 BMPR1BO00238 502 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 WNT9BO14905 357 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 TSPAN13O95857 204 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 IFI6P09912 130 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 HTR1DP28221 377 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 SSTR5P35346 364 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 PTGDSP41222 190 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 ADAMTSL5Q6ZMM2 481 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 OR8B3Q8NGG8 313 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 FAM168AQ92567 244 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 KCNS1Q96KK3 526 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 TANC2Q9HCD6 1990 aa8.4□□□□□ -1.06
PDGFRB-207ENST00000520579 KBTBD11-OT1A0A1B0GTJ5 212 aa8.4□□□□□ -1.07
PDGFRB-207ENST00000520579 FABP2P12104 132 aa8.4□□□□□ -1.07
PDGFRB-207ENST00000520579 CRYGSP22914 178 aa8.4□□□□□ -1.07
PDGFRB-207ENST00000520579 GDF1P27539 372 aa8.4□□□□□ -1.07
PDGFRB-207ENST00000520579 OR8B8Q15620 311 aa8.4□□□□□ -1.07
PDGFRB-207ENST00000520579 TCF24Q7RTU0 167 aa8.4□□□□□ -1.07
PDGFRB-207ENST00000520579 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 ASCL2Q99929 193 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 WDFY4Q6ZS81 3184 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 CACNA1HO95180 2353 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 LRRC30A6NM36 301 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 MRPL33O75394 65 aaKnown RBP8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 RFPL3SP0C7P2 107 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 FXYD7P58549 80 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 C1orf53Q5VUE5 145 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 TMEM251Q8N6I4 163 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 C3orf56Q8N813 242 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 OR4A16Q8NH70 328 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 MLNRO43193 412 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 FOXL1Q12952 345 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 OR10D3Q8NH80 312 aa8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 BOKQ9UMX3 212 aaPredicted RBP8.39□□□□□ -1.07
PDGFRB-207ENST00000520579 A0A0G2JLM5 398 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 MFAP4P55083 255 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 ETDBQ3ZM63 59 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 ZNF766Q5HY98 468 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 EBLN2Q6P2I7 272 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 TMEM14EPQ6UXP3 125 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 Q8N976 141 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 SLC25A40Q8TBP6 338 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 PCNX1Q96RV3 2341 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 OR2H2O95918 312 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 ST20Q9HBF5 79 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 GNG12Q9UBI6 72 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 NKX2-8O15522 239 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 IGLV3-1P01715 115 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 SMIM17P0DL12 118 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 GCHFRP30047 84 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 SUMO3P55854 103 aaPredicted RBP8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 LGALS4P56470 323 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 SSBP2P81877 361 aaPredicted RBP8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 MLANAQ16655 118 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 OR4F17Q8NGA8 305 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 KCNIP2Q9NS61 270 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 ASPMQ8IZT6 3477 aa8.38□□□□□ -1.07
PDGFRB-207ENST00000520579 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 K7EP34 96 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 UBE2G1P62253 170 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 ZNF391Q9UJN7 358 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 CPAMD8Q8IZJ3 1885 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 IBA57Q5T440 356 aaKnown RBP8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 A6NDN8 102 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 NPIPB13A6NJU9 1138 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 NPIPB4C9JG80 1138 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 F2RL2O00254 374 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 OR9G9P0C7N8 305 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 CATR1Q13166 79 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 VWC2Q2TAL6 325 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 WFDC3Q8IUB2 231 aa8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 NFAM1Q8NET5 270 aaPredicted RBP8.37□□□□□ -1.07
PDGFRB-207ENST00000520579 ZNF418Q8TF45 676 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms