RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 NECAP2Q9NVZ3 263 aa5.26□□□□□ -1.57
SDCBP-208ENST00000520228 ZNF107Q9UII5 783 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-208ENST00000520228 LINC00527Q9UJ94 153 aa5.26□□□□□ -1.57
SDCBP-208ENST00000520228 IGKV1D-13A0A0B4J2D9 117 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 NDUFA3O95167 84 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 HLA-DRB1P01911 266 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 IGF1P05019 195 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 IGKV1-13P0DP09 117 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 RRASP10301 218 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 VDAC1P21796 283 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 LGALS7P47929 136 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 CDK10Q15131 360 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 PSG5Q15238 335 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 RTL8BQ17RB0 113 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 C10orf99Q6UWK7 81 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 SNX29P2Q8IUI4 249 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 COMMD1Q8N668 190 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 ZNF645Q8N7E2 425 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 OR4F17Q8NGA8 305 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 C5orf30Q96GV9 206 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 OR4F4Q96R69 305 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 OR51J1Q9H342 316 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 FBXL15Q9H469 300 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 METTL1Q9UBP6 276 aaKnown RBP5.25□□□□□ -1.57
SDCBP-208ENST00000520228 UBQLN2Q9UHD9 624 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 TSSC4Q9Y5U2 329 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-208ENST00000520228 MEGF8Q7Z7M0 2845 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 DSCAML1Q8TD84 2053 aa5.25□□□□□ -1.57
SDCBP-208ENST00000520228 IGHV7-81A0A0B4J1V7 117 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 H3BMQ9 156 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 FCN1O00602 326 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 RGS5O15539 181 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 PPYP01298 95 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 PMP2P02689 132 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 HLA-DMAP28067 261 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 TAS2R46P59540 309 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 KIAA0141Q14154 515 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-208ENST00000520228 ZNF660Q6AZW8 331 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-208ENST00000520228 Q8N377 158 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 OR5H2Q8NGV7 314 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 GPX8Q8TED1 209 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 C15orf40Q8WUR7 153 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 GIMAP1Q8WWP7 306 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 ISOC1Q96CN7 298 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 CLCC1Q96S66 551 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 HSD17B10Q99714 261 aaKnown RBP5.24□□□□□ -1.57
SDCBP-208ENST00000520228 DCUN1D5Q9BTE7 237 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 SLC5A7Q9GZV3 580 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 PARP11Q9NR21 331 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 EHFQ9NZC4 300 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 CCDC59Q9P031 241 aaKnown RBP5.24□□□□□ -1.57
SDCBP-208ENST00000520228 EXTL2Q9UBQ6 330 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 ANAPC10Q9UM13 185 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 RBMX2Q9Y388 322 aaKnown RBP5.24□□□□□ -1.57
SDCBP-208ENST00000520228 PRELID3BQ9Y3B1 194 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 WSB1Q9Y6I7 421 aa5.24□□□□□ -1.57
SDCBP-208ENST00000520228 TRAV41A0A0B4J266 112 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 CCDC160A6NGH7 325 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 G3V318 75 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 SULT1C2O00338 296 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 CNIH1O95406 144 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 CRYZL1O95825 349 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 IGLV2-23P01705 113 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 IGHG4P01861 327 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 RCVRNP35243 200 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 FXYD4P59646 89 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 RPL23AP62750 156 aaKnown RBP5.23□□□□□ -1.57
SDCBP-208ENST00000520228 MSMO1Q15800 293 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 VMA21Q3ZAQ7 101 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 ZNF562Q6V9R5 426 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 KCTD9Q7L273 389 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 GTSCR1Q86UQ5 136 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 TMEM17Q86X19 198 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 OR6F1Q8NGZ6 308 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 DYNC2LI1Q8TCX1 351 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 TCTEX1D2Q8WW35 142 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 MIXL1Q9H2W2 232 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 CCL28Q9NRJ3 127 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 TAS2R8Q9NYW2 309 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 TRRAPQ9Y4A5 3859 aa5.23□□□□□ -1.57
SDCBP-208ENST00000520228 NOTCH1P46531 2555 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 C13orf42A0A1B0GVH6 325 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 CA2P00918 260 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 CRYGBP07316 175 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 HRH1P35367 487 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 UBE2KP61086 200 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 TSPAN5P62079 268 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 RPL30P62888 115 aaKnown RBP5.22□□□□□ -1.57
SDCBP-208ENST00000520228 NDPQ00604 133 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 TMEM267Q0VDI3 215 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-208ENST00000520228 PJVKQ0ZLH3 352 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 EIF4EBP1Q13541 118 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-208ENST00000520228 FXYD3Q14802 87 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 ECSCRQ19T08 205 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 OR2B11Q5JQS5 317 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 PPP1R27Q86WC6 154 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 ZNF695Q8IW36 515 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 LAX1Q8IWV1 398 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 MINDY2Q8NBR6 621 aa5.22□□□□□ -1.57
SDCBP-208ENST00000520228 OR4S2Q8NH73 311 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms