RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 PI3P19957 117 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 RNASE12Q5GAN4 147 aaKnown RBP18.81■□□□□ 0.6
VEGFA-220ENST00000519767 GPR107Q5VW38 600 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 KIR2DL5AQ8N109 375 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 STPG3Q8N7X2 389 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 CCDC71LQ8N9Z2 235 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 TMEM229BQ8NBD8 167 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 KIR2DL5BQ8NHK3 375 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 COPZ2Q9P299 210 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 LYSTQ99698 3801 aa18.81■□□□□ 0.6
VEGFA-220ENST00000519767 A0A0B4J293 547 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 CHEK1O14757 476 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 SPRY2O43597 315 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 IGKV1-5P01602 117 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 CD74P04233 296 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 CD5P06127 495 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 BMI1P35226 326 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 NPBWR1P48145 328 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 SUB1P53999 127 aaKnown RBP eCLIP18.8■□□□□ 0.6
VEGFA-220ENST00000519767 SSBP1Q04837 148 aaKnown RBP18.8■□□□□ 0.6
VEGFA-220ENST00000519767 ODF3L2Q3SX64 289 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 DUSP18Q8NEJ0 188 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 PINX1Q96BK5 328 aaKnown RBP18.8■□□□□ 0.6
VEGFA-220ENST00000519767 TP53RKQ96S44 253 aa18.8■□□□□ 0.6
VEGFA-220ENST00000519767 C6orf62Q9GZU0 229 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-220ENST00000519767 IFNA17P01571 189 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 P0C879 139 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 SMIM18P0DKX4 95 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 AKR1C2P52895 323 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 TAS2R19P59542 299 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 SLC35G3Q8N808 338 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 GALNT14Q96FL9 552 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 RNF2Q99496 336 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 PDCD10Q9BUL8 212 aa18.79■□□□□ 0.6
VEGFA-220ENST00000519767 RAB3DO95716 219 aa18.78■□□□□ 0.6
VEGFA-220ENST00000519767 MRPS10P82664 201 aaKnown RBP18.78■□□□□ 0.6
VEGFA-220ENST00000519767 IZUMO4Q1ZYL8 232 aa18.78■□□□□ 0.6
VEGFA-220ENST00000519767 RRNAD1Q96FB5 475 aaKnown RBP18.78■□□□□ 0.6
VEGFA-220ENST00000519767 ZNF414Q96IQ9 312 aa18.78■□□□□ 0.6
VEGFA-220ENST00000519767 GINS3Q9BRX5 216 aa18.78■□□□□ 0.6
VEGFA-220ENST00000519767 DNAH1Q9P2D7 4330 aa18.78■□□□□ 0.6
VEGFA-220ENST00000519767 GABARAPH6UMI1 98 aa18.77■□□□□ 0.6
VEGFA-220ENST00000519767 IGHV3-48P01763 117 aa18.77■□□□□ 0.6
VEGFA-220ENST00000519767 TRIM16LQ309B1 348 aa18.77■□□□□ 0.6
VEGFA-220ENST00000519767 STEAP1BQ6NZ63 245 aa18.77■□□□□ 0.6
VEGFA-220ENST00000519767 CORTO00230 105 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 ST8SIA3O43173 380 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 PAFAH1B2P68402 229 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 TNFRSF9Q07011 255 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 SCGB2B2Q4G0G5 96 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 PVRIGQ6DKI7 326 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 GPR141Q7Z602 305 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 OR4D10Q8NGI6 311 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 OR13C8Q8NGS7 320 aa18.76■□□□□ 0.59
VEGFA-220ENST00000519767 RGS5O15539 181 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 UCP1P25874 307 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 PPP5CP53041 499 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 MEF2DQ14814 521 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 SP6Q3SY56 376 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 SPINK9Q5DT21 86 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 RNF183Q96D59 192 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 MRPS26Q9BYN8 205 aaKnown RBP18.75■□□□□ 0.59
VEGFA-220ENST00000519767 ENY2Q9NPA8 101 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 RABL2AQ9UBK7 228 aaPredicted RBP18.75■□□□□ 0.59
VEGFA-220ENST00000519767 RABL2BQ9UNT1 228 aa18.75■□□□□ 0.59
VEGFA-220ENST00000519767 TMEM50AO95807 157 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 ETV6P41212 452 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 FAM90A2PQ658T7 463 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 TOMM20LQ6UXN7 152 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 ZNF600Q6ZNG1 722 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 FAM219AQ8IW50 185 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 MARCH1Q8TCQ1 289 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 MIXL1Q9H2W2 232 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 MAP6D1Q9H9H5 199 aa18.74■□□□□ 0.59
VEGFA-220ENST00000519767 ATF4P18848 351 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-220ENST00000519767 DEFB135Q30KP9 77 aa18.73■□□□□ 0.59
VEGFA-220ENST00000519767 RNASE11Q8TAA1 199 aaKnown RBP18.73■□□□□ 0.59
VEGFA-220ENST00000519767 IGHV3-49A0A0A0MS15 119 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 A0A0J9YWU9 116 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 CTDSP2O14595 271 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 CDS2O95674 445 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 RPL35AP18077 110 aaKnown RBP18.72■□□□□ 0.59
VEGFA-220ENST00000519767 RPL5P46777 297 aaKnown RBP18.72■□□□□ 0.59
VEGFA-220ENST00000519767 ALDH3B2P48448 385 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 HOXA1P49639 335 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-220ENST00000519767 SURF2Q15527 256 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-220ENST00000519767 LYG2Q86SG7 212 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 TMEM222Q9H0R3 208 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 VSIRQ9H7M9 311 aa18.72■□□□□ 0.59
VEGFA-220ENST00000519767 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-220ENST00000519767 C14orf166Q9Y224 244 aaKnown RBP18.72■□□□□ 0.59
VEGFA-220ENST00000519767 DISC1C4P0D8 188 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 SCGB2A1O75556 95 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 RNASE2P10153 161 aaKnown RBP18.71■□□□□ 0.59
VEGFA-220ENST00000519767 SPCS3P61009 180 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 TCF24Q7RTU0 167 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 APRG1Q8IVJ8 170 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 TMEM217Q8N7C4 229 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 CSTL1Q9H114 145 aa18.71■□□□□ 0.59
VEGFA-220ENST00000519767 PUS1Q9Y606 427 aaKnown RBP eCLIP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms