RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 EVI2AP22794 236 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 GATA2P23769 480 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 NHLH2Q02577 135 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 PRR4Q16378 134 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 TPRA1Q86W33 373 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 MCUR1Q96AQ8 359 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 GINS3Q9BRX5 216 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 DCUN1D5Q9BTE7 237 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 TMEM208Q9BTX3 173 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 ZNF446Q9NWS9 450 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 PAK1IP1Q9NWT1 392 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 SAMHD1Q9Y3Z3 626 aaKnown RBP4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 A0A0A6YYD4 124 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 RBFOX3A6NFN3 312 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 J3QRK9 145 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 M0R2Z0 102 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 IGLV2-14P01704 120 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 HTR1AP08908 422 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 CD37P11049 281 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 HTR2CP28335 458 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 HOXA1P49639 335 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 RORCP51449 518 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 TPBGQ13641 420 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 FOXI2Q6ZQN5 318 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 C9orf47Q6ZRZ4 202 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 ARPINQ7Z6K5 226 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 BAP18Q8IXM2 172 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 RNASE8Q8TDE3 154 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 BAALCQ8WXS3 180 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 ZNF184Q99676 751 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 WDR12Q9GZL7 423 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 SAR1AQ9NR31 198 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 ARL8BQ9NVJ2 186 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 KLK11Q9UBX7 282 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 VAX2Q9UIW0 290 aa4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 TIMM8BQ9Y5J9 83 aaPredicted RBP4.23□□□□□ -1.73
CTNNA1-216ENST00000519489 K7EP13 123 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 ADAP1O75689 374 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 CRTAPO75718 401 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 PRKACGP22612 351 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 NPPCP23582 126 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 CLDN12P56749 244 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 SNRPD3P62318 126 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 EIF4EBP1Q13541 118 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 RCN1Q15293 331 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 ACSM3Q53FZ2 586 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 ZNF600Q6ZNG1 722 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 LYSMD2Q8IV50 215 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 OR13F1Q8NGS4 319 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 TMEM37Q8WXS4 190 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 IL22RA2Q969J5 263 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 CPNE2Q96FN4 548 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 S100A13Q99584 98 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 KCNK15Q9H427 330 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 CHMP1AQ9HD42 196 aaPredicted RBP4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 TMEM138Q9NPI0 162 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 MRPL36Q9P0J6 103 aaKnown RBP4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 AK3Q9UIJ7 227 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 MGAT4AQ9UM21 535 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 KIF25-AS1Q9Y6Z4 181 aa4.22□□□□□ -1.73
CTNNA1-216ENST00000519489 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 TRAV8-7A0A075B6U6 113 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 A0A0J9YX75 114 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 TEX50A0A1B0GTY4 177 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 RNF222A6NCQ9 220 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 J3QRE1 110 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 UPK2O00526 184 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 SOCS3O14543 225 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 SLC16A6O15403 523 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 OGG1O15527 345 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM127O75204 238 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 BDKRB2P30411 391 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 MFAP4P55083 255 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 PSME3P61289 254 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 FOXI1Q12951 378 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 TIMM50Q3ZCQ8 353 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 FAM220AQ7Z4H9 259 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 THAP8Q8NA92 274 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 OR10J6PQ8NGY7 276 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 GPR148Q8TDV2 347 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 GIPC3Q8TF64 312 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 ADTRPQ96IZ2 230 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 SLC35E1Q96K37 410 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 ABHD1Q96SE0 405 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 UQCC2Q9BRT2 126 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 HINT2Q9BX68 163 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 QTRT1Q9BXR0 403 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 TMEM231Q9H6L2 316 aa4.21□□□□□ -1.74
CTNNA1-216ENST00000519489 TRBV6-7A0A0A0MS04 114 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 J3QLW9 94 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 BET1O15155 118 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 MT-CO2P00403 227 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 CLEC2LP0C7M8 214 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 HTN1P15515 57 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 ZNF19P17023 458 aa4.2□□□□□ -1.74
CTNNA1-216ENST00000519489 MNAT1P51948 309 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms