RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PBDC1Q9BVG4 233 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 METTL1Q9UBP6 276 aaKnown RBP11.54□□□□□ -0.56
CLN8-204ENST00000519254 ABCA1O95477 2261 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 RBFOX3A6NFN3 312 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 MBP02144 154 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 MAS1LP35410 378 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 DEFA5Q01523 94 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 KRTAP1-1Q07627 177 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 GUCA2BQ16661 112 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 LCN15Q6UWW0 184 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 PPP1R27Q86WC6 154 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 GGTLC1Q9BX51 225 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 FBXL15Q9H469 300 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 SVEP1Q4LDE5 3571 aa11.54□□□□□ -0.56
CLN8-204ENST00000519254 BAHCC1Q9P281 2608 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 NOTCH2Q04721 2471 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 FLNAP21333 2647 aaKnown RBP11.53□□□□□ -0.56
CLN8-204ENST00000519254 IGLC7A0M8Q6 106 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 CD5LO43866 347 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 EIF3GO75821 320 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLN8-204ENST00000519254 OR13C7P0DN81 318 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 OPRK1P41145 380 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 COMPP49747 757 aaPredicted RBP11.53□□□□□ -0.56
CLN8-204ENST00000519254 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
CLN8-204ENST00000519254 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
CLN8-204ENST00000519254 TNXAQ16473 311 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 MLANAQ16655 118 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 OR10G4Q8NGN3 311 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 OR10G9Q8NGN4 311 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 OR10G7Q8NGN6 311 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 YAE1D1Q9NRH1 226 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 ZANQ9Y493 2812 aa11.53□□□□□ -0.56
CLN8-204ENST00000519254 ZNF469Q96JG9 3925 aaPredicted RBP11.53□□□□□ -0.56
CLN8-204ENST00000519254 MAP1LC3B2A6NCE7 125 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 FCN1O00602 326 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 YIF1AO95070 293 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 M6PRP20645 277 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 BRS3P32247 399 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.57
CLN8-204ENST00000519254 PPT1P50897 306 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
CLN8-204ENST00000519254 P2RX4Q99571 388 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 MAP1LC3BQ9GZQ8 125 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.57
CLN8-204ENST00000519254 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 MDFIC2A0A1B0GVS7 189 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 MOSP00540 346 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 CD69Q07108 199 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 GAMTQ14353 236 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 ICAM4Q14773 271 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 HAGHQ16775 308 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 ACOT6Q3I5F7 207 aaPredicted RBP11.51□□□□□ -0.57
CLN8-204ENST00000519254 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 NPBQ8NG41 125 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 EAF1Q96JC9 268 aaPredicted RBP11.51□□□□□ -0.57
CLN8-204ENST00000519254 SMR3AQ99954 134 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 SMDT1Q9H4I9 107 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 SLC25A22Q9H936 323 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 SOX15O60248 233 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 ACTL6BO94805 426 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 REG1AP05451 166 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 FBP1P09467 338 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 DEFA4P12838 97 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 TMEM11P17152 192 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 MMDQ15546 238 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 FAM122CQ6P4D5 195 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 SPNS3Q6ZMD2 512 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 SVBPQ8N300 66 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 OR2T10Q8NGZ9 312 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
CLN8-204ENST00000519254 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
CLN8-204ENST00000519254 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 IGKV1OR2-108A0A075B7D4 117 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 NBR2O15453 112 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 NDUFA3O95167 84 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 FSHBP01225 129 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 FAM106CPP0CH98 169 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 AREGP15514 252 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 GPX4P36969 197 aaPredicted RBP11.5□□□□□ -0.57
CLN8-204ENST00000519254 SUB1P53999 127 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLN8-204ENST00000519254 GNB1P62873 340 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 PVRIGQ6DKI7 326 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 SSMEM1Q8WWF3 244 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 RAB24Q969Q5 203 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 SLC35B3Q9H1N7 401 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 GNG13Q9P2W3 67 aa11.5□□□□□ -0.57
CLN8-204ENST00000519254 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 SEC14L6B5MCN3 397 aa11.49□□□□□ -0.57
CLN8-204ENST00000519254 HMGB3O15347 200 aaKnown RBP11.49□□□□□ -0.57
CLN8-204ENST00000519254 CYB5BO43169 146 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms