RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 IFNA17P01571 189 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 IGKV1-5P01602 117 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 IGHV3-23P01764 117 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 OR5AC1P0C628 307 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 ANXA3P12429 323 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 INSL3P51460 131 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 KRTAP10-11P60412 298 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 ERHP84090 104 aaKnown RBP4.68□□□□□ -1.66
MRPS28-203ENST00000518371 BAK1Q16611 211 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 IZUMO4Q1ZYL8 232 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 PDLIM3Q53GG5 364 aaPredicted RBP4.68□□□□□ -1.66
MRPS28-203ENST00000518371 FAM209BQ5JX69 171 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM268Q5VZI3 342 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 Q6ZRM9 215 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 TMED4Q7Z7H5 227 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 SELENOHQ8IZQ5 122 aaKnown RBP4.68□□□□□ -1.66
MRPS28-203ENST00000518371 OR1L6Q8NGR2 347 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 MRAPQ8TCY5 172 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 GLYATL2Q8WU03 294 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 DEDD2Q8WXF8 326 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 TRIM63Q969Q1 353 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 EEF1AKMT3Q96AZ1 226 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 CXorf58Q96LI9 332 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 SLC25A21Q9BQT8 299 aaPredicted RBP4.68□□□□□ -1.66
MRPS28-203ENST00000518371 ENY2Q9NPA8 101 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM14BQ9NUH8 114 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 S4R3C0 116 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 PKD1L1Q8TDX9 2849 aa4.68□□□□□ -1.66
MRPS28-203ENST00000518371 NOTCH1P46531 2555 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 IGLV11-55A0A075B6I3 123 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 TRBV7-1A0A0A6YYK4 115 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 IGHV3-21A0A0B4J1V1 117 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 A0A0B4J293 547 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 NAP1L6A6NFF2 107 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 GGCTO75223 188 aaKnown RBP4.67□□□□□ -1.66
MRPS28-203ENST00000518371 OR2C1O95371 312 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 CDS2O95674 445 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 LY86O95711 162 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 TRBV12-3P01733 135 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 CLEC3BP05452 202 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 ARL3P36405 182 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 SNCAP37840 140 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 SYNJ2BPP57105 145 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 PRCDQ00LT1 54 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 WT1-ASQ06250 92 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 KLF5Q13887 457 aaPredicted RBP4.67□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM187Q14656 261 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 FAM106AQ4KMX7 169 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 SPINK9Q5DT21 86 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 ACSM6Q6P461 480 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 CLEC19AQ6UXS0 136 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 ZNF429Q86V71 674 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 FAM219AQ8IW50 185 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 OR2C3Q8N628 320 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 SLC35G3Q8N808 338 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
MRPS28-203ENST00000518371 GPR146Q96CH1 333 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 PLEKHA3Q9HB20 300 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
MRPS28-203ENST00000518371 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
MRPS28-203ENST00000518371 F11RQ9Y624 299 aaKnown RBP4.67□□□□□ -1.66
MRPS28-203ENST00000518371 VWFP04275 2813 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 PIGBOS1A0A0B4J2F0 54 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 A0A0G2JRQ6 117 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 WI2-2373I1.2A0A1W2PRP0 233 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 ZNF320A2RRD8 509 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 PPP5D1E7EU14 171 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 BMPR1BO00238 502 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 ST8SIA3O43173 380 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 HLA-AP01891 365 aaKnown RBP4.66□□□□□ -1.66
MRPS28-203ENST00000518371 IL7P13232 177 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 HOXA1P49639 335 aaPredicted RBP4.66□□□□□ -1.66
MRPS28-203ENST00000518371 CCR6P51684 374 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 SUB1P53999 127 aaKnown RBP eCLIP4.66□□□□□ -1.66
MRPS28-203ENST00000518371 SPCS3P61009 180 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 SRPXP78539 464 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 EGFEM1PQ0D2K5 195 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 KLK9Q2XQG4 91 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 CNPY1Q3B7I2 92 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 GAGE13Q4V321 117 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM128Q5BJH2 165 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 PLET1Q6UQ28 207 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 LGI3Q8N145 548 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 CENPSQ8N2Z9 138 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 OR9G4Q8NGQ1 327 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 OR1P1Q8NH06 330 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 LHFPL5Q8TAF8 219 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 VN1R17PQ8TDU5 208 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 IL22RA2Q969J5 263 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM230Q96A57 120 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 GALNT14Q96FL9 552 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 SDHCQ99643 169 aaPredicted RBP4.66□□□□□ -1.66
MRPS28-203ENST00000518371 ZC4H2Q9NQZ6 224 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 BATF3Q9NR55 127 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 CACNG5Q9UF02 275 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 KLK9Q9UKQ9 250 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 TMEM56-RWDD3S4R434 201 aa4.66□□□□□ -1.66
MRPS28-203ENST00000518371 A0A0B4J2A0 478 aa4.65□□□□□ -1.67
MRPS28-203ENST00000518371 MFSD2BA6NFX1 497 aa4.65□□□□□ -1.67
MRPS28-203ENST00000518371 CEBPZOSA8MTT3 80 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms