RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 PALMDQ9NP74 551 aa8.52□□□□□ -1.05
IGHV3-25-201ENST00000518224 GAR1Q9NY12 217 aaKnown RBP8.52□□□□□ -1.05
IGHV3-25-201ENST00000518224 MRPL27Q9P0M9 148 aaKnown RBP8.52□□□□□ -1.05
IGHV3-25-201ENST00000518224 SCP2D1Q9UJQ7 156 aa8.52□□□□□ -1.05
IGHV3-25-201ENST00000518224 C14orf166Q9Y224 244 aaKnown RBP8.52□□□□□ -1.05
IGHV3-25-201ENST00000518224 UFC1Q9Y3C8 167 aa8.52□□□□□ -1.05
IGHV3-25-201ENST00000518224 OR2T8A6NH00 312 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 AKR1C2P52895 323 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 SUPT4H1P63272 117 aaKnown RBP8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 ERHP84090 104 aaKnown RBP8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 TMEM187Q14656 261 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 TM4SF20Q53R12 229 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 GTSCR1Q86UQ5 136 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 SGPP2Q8IWX5 399 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 TMEM61Q8N0U2 210 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 UXS1Q8NBZ7 420 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 CACNG8Q8WXS5 425 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 OR10C1Q96KK4 312 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 SCGB3A2Q96PL1 93 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 PLEKHA3Q9HB20 300 aa8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 DAZ1Q9NQZ3 744 aaKnown RBP8.51□□□□□ -1.05
IGHV3-25-201ENST00000518224 CSMD3Q7Z407 3707 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 ZNF320A2RRD8 509 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 MFAP4P55083 255 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 SPCS3P61009 180 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 TRIM16LQ309B1 348 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 ZNF57Q68EA5 555 aaPredicted RBP8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 DYNLRB2Q8TF09 96 aa8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 RRNAD1Q96FB5 475 aaKnown RBP8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 DYNC2H1Q8NCM8 4307 aaKnown RBP8.5□□□□□ -1.05
IGHV3-25-201ENST00000518224 MT-CO2P00403 227 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 CD7P09564 240 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 AP3S2P59780 193 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 HAGHQ16775 308 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 NMSQ5H8A3 153 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 GPR146Q96CH1 333 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 WDR89Q96FK6 387 aaPredicted RBP8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 RCHY1Q96PM5 261 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 NEURL2Q9BR09 285 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 RYR3Q15413 4870 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 SACSQ9NZJ4 4579 aa8.49□□□□□ -1.05
IGHV3-25-201ENST00000518224 IGHV3-21A0A0B4J1V1 117 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 A0A0B4J2A0 478 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 IGHV3-35A0A0C4DH35 117 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 CORTO00230 105 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 TSPAN4O14817 238 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 IFNA17P01571 189 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 S100A5P33763 92 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 FAUP35544 74 aaKnown RBP8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 CD81P60033 236 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 RELQ04864 619 aaPredicted RBP8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 TMEM268Q5VZI3 342 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 BTNL8Q6UX41 500 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 SPAG8Q99932 426 aaPredicted RBP8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 SRRQ9GZT4 340 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 FNDC4Q9H6D8 234 aaPredicted RBP8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 SHPKQ9UHJ6 478 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 KCNIP3Q9Y2W7 256 aa8.48□□□□□ -1.05
IGHV3-25-201ENST00000518224 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 RBMY1BA6NDE4 496 aaKnown RBP8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 RBMY1EA6NEQ0 496 aaKnown RBP8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 CCDC160A6NGH7 325 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 NUPL2O15504 423 aaKnown RBP8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 RBMY1DP0C7P1 496 aaKnown RBP8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 SNCAP37840 140 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 Q56UQ5 140 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 SPINK9Q5DT21 86 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 TOMM5Q8N4H5 51 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 LRTM2Q8N967 370 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 FAM110AQ9BQ89 295 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 SLC25A21Q9BQT8 299 aaPredicted RBP8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 PDCD10Q9BUL8 212 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 MCUBQ9NWR8 336 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 CACNG5Q9UF02 275 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 SMPXQ9UHP9 88 aa8.47□□□□□ -1.05
IGHV3-25-201ENST00000518224 TENM2Q9NT68 2774 aa8.46□□□□□ -1.05
IGHV3-25-201ENST00000518224 PIGBOS1A0A0B4J2F0 54 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 DUXBA0A1W2PPF3 345 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 OR11H12B2RN74 326 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 PITX3O75364 302 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 TMEM50AO95807 157 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 HTR2BP41595 481 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 NPBWR1P48145 328 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 SRPXP78539 464 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 ANKRD55Q3KP44 614 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 C2orf83Q53S99 150 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 SPANXN2Q5MJ10 180 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 SLC16A13Q7RTY0 426 aa8.46□□□□□ -1.06
IGHV3-25-201ENST00000518224 OR4X1Q8NH49 305 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms