RNA–Protein interactions for RNA: ENST00000517684.2

RNF139-202, Transcript of ring finger protein 139, humanhuman

TSL 3

Gene RNF139, Length 467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-202ENST00000517684 SNHG12Q9BXW3 62 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 UBE2ZQ9H832 354 aaPredicted RBP4.01□□□□□ -1.77
RNF139-202ENST00000517684 NAGKQ9UJ70 344 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 TRAPPC2LQ9UL33 140 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 WIPI2Q9Y4P8 454 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 TRAPPC1Q9Y5R8 145 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 PXMP4Q9Y6I8 212 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 KNL1Q8NG31 2342 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 KMT2EQ8IZD2 1858 aa4.01□□□□□ -1.77
RNF139-202ENST00000517684 MYO9BQ13459 2157 aa4□□□□□ -1.77
RNF139-202ENST00000517684 TRAV39A0A0B4J263 110 aa4□□□□□ -1.77
RNF139-202ENST00000517684 MDFIC2A0A1B0GVS7 189 aa4□□□□□ -1.77
RNF139-202ENST00000517684 A0A1B0GWJ7 208 aa4□□□□□ -1.77
RNF139-202ENST00000517684 ODAMA1E959 279 aa4□□□□□ -1.77
RNF139-202ENST00000517684 TMEM210A6NLX4 147 aa4□□□□□ -1.77
RNF139-202ENST00000517684 LRRC30A6NM36 301 aa4□□□□□ -1.77
RNF139-202ENST00000517684 ZNF705FA8MVS1 300 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 C11orf94C9JXX5 98 aa4□□□□□ -1.77
RNF139-202ENST00000517684 SIRPB1O00241 398 aa4□□□□□ -1.77
RNF139-202ENST00000517684 HMGB3O15347 200 aaKnown RBP4□□□□□ -1.77
RNF139-202ENST00000517684 PDE6DO43924 150 aa4□□□□□ -1.77
RNF139-202ENST00000517684 PDGFBP01127 241 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 IGHV3-9P01782 118 aa4□□□□□ -1.77
RNF139-202ENST00000517684 ZNF705DP0CH99 300 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 ZNF705BP0CI00 300 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 CCL2P13500 99 aa4□□□□□ -1.77
RNF139-202ENST00000517684 NPPCP23582 126 aa4□□□□□ -1.77
RNF139-202ENST00000517684 GDF1P27539 372 aa4□□□□□ -1.77
RNF139-202ENST00000517684 GPR183P32249 361 aa4□□□□□ -1.77
RNF139-202ENST00000517684 CDC34P49427 236 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 UBE2NP61088 152 aaKnown RBP4□□□□□ -1.77
RNF139-202ENST00000517684 YPEL3P61236 119 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 GNB2P62879 340 aa4□□□□□ -1.77
RNF139-202ENST00000517684 PAFAH1B2P68402 229 aa4□□□□□ -1.77
RNF139-202ENST00000517684 TFF3Q07654 80 aa4□□□□□ -1.77
RNF139-202ENST00000517684 CATR1Q13166 79 aa4□□□□□ -1.77
RNF139-202ENST00000517684 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 C9orf135Q5VTT2 229 aa4□□□□□ -1.77
RNF139-202ENST00000517684 ZNF497Q6ZNH5 498 aa4□□□□□ -1.77
RNF139-202ENST00000517684 LINC01551Q86U37 167 aa4□□□□□ -1.77
RNF139-202ENST00000517684 Q8IYB0 196 aa4□□□□□ -1.77
RNF139-202ENST00000517684 SPEM1Q8N4L4 309 aa4□□□□□ -1.77
RNF139-202ENST00000517684 ZNF645Q8N7E2 425 aa4□□□□□ -1.77
RNF139-202ENST00000517684 TCTEX1D1Q8N7M0 179 aa4□□□□□ -1.77
RNF139-202ENST00000517684 OR5T1Q8NG75 326 aa4□□□□□ -1.77
RNF139-202ENST00000517684 CIB3Q96Q77 187 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 TAAR6Q96RI8 345 aa4□□□□□ -1.77
RNF139-202ENST00000517684 TXNDC17Q9BRA2 123 aa4□□□□□ -1.77
RNF139-202ENST00000517684 RTL8AQ9BWD3 113 aa4□□□□□ -1.77
RNF139-202ENST00000517684 NPCDR1Q9BY65 106 aa4□□□□□ -1.77
RNF139-202ENST00000517684 KCNIP2Q9NS61 270 aa4□□□□□ -1.77
RNF139-202ENST00000517684 CTNNBIP1Q9NSA3 81 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 CBLN4Q9NTU7 201 aa4□□□□□ -1.77
RNF139-202ENST00000517684 CLN8Q9UBY8 286 aa4□□□□□ -1.77
RNF139-202ENST00000517684 FOXA2Q9Y261 457 aaPredicted RBP4□□□□□ -1.77
RNF139-202ENST00000517684 GON4LQ3T8J9 2241 aa4□□□□□ -1.77
RNF139-202ENST00000517684 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 TMEM30CPA0ZSE6 113 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 PINLYPA6NC86 204 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 SH2D1BO14796 132 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 RHBDL1O75783 438 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 TNFSF13O75888 250 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 OR2H2O95918 312 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ESDP10768 282 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ZNF25P17030 456 aaPredicted RBP3.99□□□□□ -1.77
RNF139-202ENST00000517684 G0S2P27469 103 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 CD82P27701 267 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 G6PCP35575 357 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ATP5G3P48201 142 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 TPPP2P59282 170 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ERVK11-1P61568 191 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 SELENOTP62341 195 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 RANP62826 216 aaKnown RBP3.99□□□□□ -1.77
RNF139-202ENST00000517684 RPL30P62888 115 aaKnown RBP3.99□□□□□ -1.77
RNF139-202ENST00000517684 PMP22Q01453 160 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ZNF816Q0VGE8 651 aaPredicted RBP3.99□□□□□ -1.77
RNF139-202ENST00000517684 ESPL1Q14674 2120 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 PRSS8Q16651 343 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 MRGPRG-AS1Q2M3A8 158 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ETFRF1Q6IPR1 90 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 CD164L2Q6UWJ8 174 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 TMEM256Q8N2U0 113 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 CMTM2Q8TAZ6 248 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 DTD1Q8TEA8 209 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 RAB1CQ92928 201 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 APH1AQ96BI3 265 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 WFIKKN1Q96NZ8 548 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 TBX15Q96SF7 602 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 C20orf144Q9BQM9 153 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 DEPPQ9NTK1 212 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 DCAF16Q9NXF7 216 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 KCNIP1Q9NZI2 227 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 BOKQ9UMX3 212 aaPredicted RBP3.99□□□□□ -1.77
RNF139-202ENST00000517684 POLDIP2Q9Y2S7 368 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ARHGAP21Q5T5U3 1957 aa3.99□□□□□ -1.77
RNF139-202ENST00000517684 ASCC3Q8N3C0 2202 aaKnown RBP3.99□□□□□ -1.77
RNF139-202ENST00000517684 A0A1W2PPV4 95 aa3.98□□□□□ -1.77
RNF139-202ENST00000517684 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
RNF139-202ENST00000517684 C17orf98A8MV24 154 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms