RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 MYLKQ15746 1914 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 NOXRED1Q6NXP6 359 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 CLVS1Q8IUQ0 354 aaPredicted RBP1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 Q8NAQ8 132 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 NUP35Q8NFH5 326 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 OR5C1Q8NGR4 320 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 ZNF675Q8TD23 568 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 SMCR5Q8TEV8 140 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 LZICQ8WZA0 190 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 CCDC32Q9BV29 185 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 SPEF2Q9C093 1822 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 RNF122Q9H9V4 155 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 SPANXA1Q9NS26 97 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 JPT1Q9UK76 154 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 PCTPQ9UKL6 214 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 KLK12Q9UKR0 248 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 ASB4Q9Y574 426 aa1.53□□□□□ -2.16
SCARNA3-201ENST00000517097 LTBP2Q14767 1821 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ARHGEF28Q8N1W1 1705 aaKnown RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 TOPBP1Q92547 1522 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 TECPR2O15040 1411 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 IGKV2D-24A0A075B6R9 120 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 A0A1B0GU33 70 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 DUXBA0A1W2PPF3 345 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ARL5CA6NH57 179 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 COLCA2A8K830 154 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 FABP5P3A8MUU1 101 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 C1orf196B1AJZ1 125 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 GGTLC3B5MD39 225 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 M0QZK8 103 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 TXNDC9O14530 226 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 UBFD1O14562 309 aaKnown RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 CYB5BO43169 146 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 NPYP01303 97 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 C1QAP02745 245 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 CCL5P13501 91 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF22P17026 224 aaPredicted RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 HLA-DMBP28068 263 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 GTF2A1P52655 376 aaPredicted RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 CDC42P60953 191 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 HIST1H4AP62805 103 aaKnown RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 AKR1C1Q04828 323 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 MIAQ16674 131 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 KRTAP25-1Q3LHN0 102 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ZFAND6Q6FIF0 208 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF705AQ6ZN79 300 aaPredicted RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM136Q6ZRR5 245 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF767PQ75MW2 155 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM86AQ8N2M4 240 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 OR9Q1Q8NGQ5 310 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 THEM6Q8WUY1 208 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF285Q96NJ3 590 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 CCDC115Q96NT0 180 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 HSPB9Q9BQS6 159 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 MIEN1Q9BRT3 115 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 SCRT1Q9BWW7 348 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 OR2J1Q9GZK6 312 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 OR8D2Q9GZM6 311 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 RBM7Q9Y580 266 aaKnown RBP1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 HEY1Q9Y5J3 304 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 SCN3AQ9NY46 2000 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 PCDH15Q96QU1 1955 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 PLXNA3P51805 1871 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 ZSWIM8A7E2V4 1837 aa1.52□□□□□ -2.17
SCARNA3-201ENST00000517097 SLIT3O75094 1523 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 SPATA31E1Q6ZUB1 1445 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 NCOA3Q9Y6Q9 1424 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 KIAA1549Q9HCM3 1950 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 IGLV4-60A0A075B6I1 120 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 IGHV3-15A0A0B4J1V0 119 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF860A6NHJ4 632 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 TAX1BP3O14907 124 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 CST8O60676 142 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 IGHV3-7P01780 117 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 RPL7P18124 248 aaKnown RBP1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 OGNP20774 298 aaKnown RBP1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 RPS3P23396 243 aaKnown RBP eCLIP1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 S100A4P26447 101 aaKnown RBP1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 XCL1P47992 114 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF117Q03924 483 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 KISS1Q15726 138 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 RRN3P1Q2M238 152 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 DEFB115Q30KQ5 88 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 CCDC153Q494R4 210 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 LINC01554Q52M75 96 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 SPANXN3Q5MJ09 141 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 ANGPTL5Q86XS5 388 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 LYPD6Q86Y78 171 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 C1orf64Q8NEQ6 169 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 OR52R1Q8NGF1 315 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 TERB2Q8NHR7 220 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 DCANP1Q8TF63 244 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 DNAJC9Q8WXX5 260 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 FGF13Q92913 245 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 SLAMF6Q96DU3 332 aa1.51□□□□□ -2.17
SCARNA3-201ENST00000517097 TCEAL4Q96EI5 215 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms