RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TRAPPC6AO75865 159 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 GTF2E2P29084 291 aaKnown RBP-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 LAMTOR1Q6IAA8 161 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 DPPA3Q6W0C5 159 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 TMEM56Q96MV1 263 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 BPESC1Q9GZL8 116 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 C6orf62Q9GZU0 229 aaPredicted RBP-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 DEFB129Q9H1M3 183 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 TCEAL2Q9H3H9 227 aaPredicted RBP-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 RWDD1Q9H446 243 aaPredicted RBP-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 PLXNB2O15031 1838 aa-3.8□□□□□ -3.02
RNU6-539P-201ENST00000516665 CFAP46Q8IYW2 2715 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 TRAV10A0A0B4J240 114 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 A0A1B0GW54 56 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR2AG2A6NM03 316 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 ZNF593O00488 134 aaPredicted RBP-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 HSP90AA1P07900 732 aaKnown RBP-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 TAS2R60P59551 318 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 RPL31P62899 125 aaKnown RBP-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 NANOGNBQ7Z5D8 188 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR51A7Q8NH64 312 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 CANT1Q8WVQ1 401 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 CIDECQ96AQ7 238 aaPredicted RBP-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 PPCDCQ96CD2 204 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 CXorf21Q9HAI6 301 aa-3.81□□□□□ -3.02
RNU6-539P-201ENST00000516665 TRBV11-1A0A0K0K1C0 115 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 NCF1BA6NI72 391 aaPredicted RBP-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 MCRIP1C9JLW8 97 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 H7C2Y5 167 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 SPRR1BP22528 89 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 CSKP41240 450 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 SNAP25P60880 206 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 BATFQ16520 125 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 MESTQ5EB52 335 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 FAM183BPQ6ZVS7 135 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR8D4Q8NGM9 314 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 TMEM237Q96Q45 408 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 PRELID1Q9Y255 219 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 KIF3AQ9Y496 699 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 RAB3GAP2Q9H2M9 1393 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 TANC2Q9HCD6 1990 aa-3.82□□□□□ -3.02
RNU6-539P-201ENST00000516665 INSRP06213 1382 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 BUB1B-PAK6H3BSN5 160 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 I3L521 148 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR2B3O76000 313 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 MT1HL1P0DM35 61 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 PTNP21246 168 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 S100A7P31151 101 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 TMEM33P57088 247 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 YWHAEP62258 255 aaKnown RBP-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 HAMPP81172 84 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 CCDC152Q4G0S7 254 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 KHDC3LQ587J8 217 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 FAM122BQ7Z309 247 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR2W3Q7Z3T1 314 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 ATP5L2Q7Z4Y8 100 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR52L1Q8NGH7 329 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 OR4A15Q8NGL6 344 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 GNPDA2Q8TDQ7 276 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 ISOC1Q96CN7 298 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 CENPKQ9BS16 269 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 GON7Q9BXV9 100 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 EMC3Q9P0I2 261 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 PSME2Q9UL46 239 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 SLC35A3Q9Y2D2 325 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 TRIOO75962 3097 aa-3.83□□□□□ -3.02
RNU6-539P-201ENST00000516665 KCNE1BA0A087WTH5 132 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 A0A0G2JMM0 328 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 A0A1W2PPB8 328 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 FABP5P3A8MUU1 101 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 KIR3DP1A8MWS1 328 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 GOLGA8RI6L899 631 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 M0QYV0 167 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 GPR171O14626 319 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 RPS3P23396 243 aaKnown RBP eCLIP-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 AIF1P55008 147 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 MT1XP80297 61 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 KLKP1Q107X0 134 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 ESRGQ1W209 222 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 SAPCD1Q5SSQ6 148 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 CD200R1LQ6Q8B3 271 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 MS4A6EQ96DS6 147 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 NSRP1Q9H0G5 558 aaKnown RBP-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 C14orf132Q9NPU4 83 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 SNX10Q9Y5X0 201 aa-3.84□□□□□ -3.02
RNU6-539P-201ENST00000516665 FRYQ5TBA9 3013 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 PQLC2LA1A4F0 135 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 SMCO3A2RU48 225 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 CXCL8P10145 99 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 FGF6P10767 208 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 RAB13P51153 203 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 PPP1R7Q15435 360 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 NECAB1Q8N987 351 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 GPER1Q99527 375 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 GINS4Q9BRT9 223 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 CCDC94Q9BW85 323 aaPredicted RBP-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 C1orf21Q9H246 121 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 ACOT13Q9NPJ3 140 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 PCTPQ9UKL6 214 aa-3.85□□□□□ -3.03
RNU6-539P-201ENST00000516665 CSMD1Q96PZ7 3565 aa-3.85□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms