RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
SH3TC1-225ENST00000515682 FBLL1A6NHQ2 334 aaKnown RBP11.29□□□□□ -0.6
SH3TC1-225ENST00000515682 RPL24P83731 157 aaKnown RBP11.29□□□□□ -0.6
SH3TC1-225ENST00000515682 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
SH3TC1-225ENST00000515682 KIR2DS2P43631 304 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 GFRA1P56159 465 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 LGALS4P56470 323 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 MYOD1P15172 320 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 CCL17Q92583 94 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 AARDQ4LEZ3 155 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 BPIFA4PQ86YQ2 179 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 HARBI1Q96MB7 349 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 METRNQ9UJH8 293 aa11.28□□□□□ -0.6
SH3TC1-225ENST00000515682 A0A1W2PS18 150 aa11.27□□□□□ -0.6
SH3TC1-225ENST00000515682 TSPOP30536 169 aa11.27□□□□□ -0.6
SH3TC1-225ENST00000515682 PRRX1P54821 245 aa11.27□□□□□ -0.6
SH3TC1-225ENST00000515682 Q0VFX4 171 aa11.27□□□□□ -0.6
SH3TC1-225ENST00000515682 MAJINQ3KP22 176 aa11.27□□□□□ -0.6
SH3TC1-225ENST00000515682 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.6
SH3TC1-225ENST00000515682 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 PGPA6NDG6 321 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 SRSF6Q13247 344 aaKnown RBP11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 ZNF841Q6ZN19 808 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 RAB37Q96AX2 223 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 RCHY1Q96PM5 261 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 YPEL3P61236 119 aaPredicted RBP11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 FAM201AQ5SY85 155 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 ACP7Q6ZNF0 438 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 COLCA1Q6ZS62 124 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 CLEC7AQ9BXN2 247 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 TMEM131Q92545 1883 aa11.27□□□□□ -0.61
SH3TC1-225ENST00000515682 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 IGLC3P0DOY3 106 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 FCER1GP30273 86 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 TNXAQ16473 311 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 HIGD1CA8MV81 97 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 M0QZ24 198 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 MLNRO43193 412 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 CD3EP07766 207 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 LHX2P50458 406 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 GAGE1Q13065 139 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 NRN1LQ496H8 165 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 C12orf54Q6X4T0 127 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 CALYQ9NYX4 217 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 MGST3O14880 152 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 CA7P43166 264 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 LINC00479Q96M42 142 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 UBE2V1Q13404 147 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
SH3TC1-225ENST00000515682 MUC22E2RYF6 1773 aaPredicted RBP11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 PYYP10082 97 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 CLDN18P56856 261 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 TMEM177Q53S58 311 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 OR10J3Q5JRS4 329 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 IZUMO1RA6ND01 250 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 A8MWL6 223 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 CX3CL1P78423 397 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 LHFPL4Q7Z7J7 247 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 TSKUQ8WUA8 353 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 RAB1CQ92928 201 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 FAM208BQ5VWN6 2430 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 EML6Q6ZMW3 1958 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 DNAH14Q0VDD8 3507 aa11.25□□□□□ -0.61
SH3TC1-225ENST00000515682 GNG5P63218 68 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 TBR1Q16650 682 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 Q6ZSR3 168 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 NIT1Q86X76 327 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 RAXQ9Y2V3 346 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 ACACBO00763 2458 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 MED12LQ86YW9 2145 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
SH3TC1-225ENST00000515682 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms