RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620		I3L2K1	104 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	MT-CO2	P00403	227 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	RANBP1	P43487	201 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	NUTF2	P61970	127 aa	Known RBP	7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	RPS25	P62851	125 aa	Known RBP	7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	SPHAR	Q15513	63 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	PSMG4	Q5JS54	123 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	FAM222A	Q5U5X8	452 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	PQLC1	Q8N2U9	271 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	BPIFB6	Q8NFQ5	453 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	OR13F1	Q8NGS4	319 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	OR1P1	Q8NH06	330 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	UFD1	Q92890	307 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	PINX1	Q96BK5	328 aa	Known RBP	7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	C18orf15	Q96N68	181 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	RAB40C	Q96S21	281 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	ATG5	Q9H1Y0	275 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	PLEKHA2	Q9HB19	425 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	DKK2	Q9UBU2	259 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	ANXA10	Q9UJ72	324 aa		7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	LSM2	Q9Y333	95 aa	Known RBP	7.42	□□□□□ -1.22
CLDND1-231	ENST00000515620	MARCH11	A6NNE9	402 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	ATP5H	O75947	161 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	RAB6A	P20340	208 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	FGF9	P31371	208 aa	Predicted RBP	7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	P2RY1	P47900	373 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	OR10A3	P58181	314 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	MSMO1	Q15800	293 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	CDNF	Q49AH0	187 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620		Q5VSD8	79 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	AADACL3	Q5VUY0	350 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZNRF2	Q8NHG8	242 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	DCANP1	Q8TF63	244 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	SLC5A7	Q9GZV3	580 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	FKBP14	Q9NWM8	211 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	COMMD9	Q9P000	198 aa		7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620	FLG2	Q5D862	2391 aa	Predicted RBP	7.41	□□□□□ -1.22
CLDND1-231	ENST00000515620		A0A1B0GU03	582 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620		A0A1W2PS18	150 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	TMEM235	A6NFC5	223 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	HELT	A6NFD8	242 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZNF705F	A8MVS1	300 aa	Predicted RBP	7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	SNAPC5	O75971	98 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	GNAO1	P09471	354 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZNF705D	P0CH99	300 aa	Predicted RBP	7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZNF705B	P0CI00	300 aa	Predicted RBP	7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	PTHLH	P12272	177 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	FCGR2C	P31995	323 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	FXYD4	P59646	89 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ARL6IP1	Q15041	203 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	HACD4	Q5VWC8	232 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZNF705A	Q6ZN79	300 aa	Predicted RBP	7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZNF600	Q6ZNG1	722 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	C15orf53	Q8NAA6	179 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	ZBTB34	Q8NCN2	500 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	MOB3A	Q96BX8	217 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	TMEM56	Q96MV1	263 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	NEU1	Q99519	415 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	PLCXD1	Q9NUJ7	323 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	RFNG	Q9Y644	331 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	MYCBP2	O75592	4640 aa		7.4	□□□□□ -1.22
CLDND1-231	ENST00000515620	DBX1	A6NMT0	343 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	IFITM5	A6NNB3	132 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	SSX5	O60225	188 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	KRAS	P01116	189 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	PPY	P01298	95 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	HSMCR30	P0CW71	290 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	NPPC	P23582	126 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	GNG2	P59768	71 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	ARPC4	P59998	168 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	DHRS2	Q13268	280 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	ZNF818P	Q6ZRF7	136 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	TMEM17	Q86X19	198 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	C8orf59	Q8N0T1	100 aa	Predicted RBP	7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	DHRSX	Q8N5I4	330 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	METTL26	Q96S19	204 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	S100A14	Q9HCY8	104 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	PRND	Q9UKY0	176 aa		7.39	□□□□□ -1.23
CLDND1-231	ENST00000515620	SMIM9	A6NGZ8	99 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620		H3BMM0	161 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	G6PC	P35575	357 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	PPP5C	P53041	499 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	FXYD7	P58549	80 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	DAD1	P61803	113 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	FABP5	Q01469	135 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	OXA1L	Q15070	435 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	TPRA1	Q86W33	373 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	LYPD1	Q8N2G4	141 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	FRZB	Q92765	325 aa		7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	YTHDF2	Q9Y5A9	579 aa	Known RBP	7.38	□□□□□ -1.23
CLDND1-231	ENST00000515620	PTGES3L	E9PB15	166 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	PDCD5	O14737	125 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	IGKV3-20	P01619	116 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	RLN1	P04808	185 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	PSMA1	P25786	263 aa	Known RBP	7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	CRYBB3	P26998	211 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	NPBWR1	P48145	328 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	SNRPD3	P62318	126 aa	Known RBP	7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	TRAM1	Q15629	374 aa		7.37	□□□□□ -1.23
CLDND1-231	ENST00000515620	KCTD21	Q4G0X4	260 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms