RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 HEATR5BQ9P2D3 2071 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 C9orf84Q5VXU9 1444 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 TRAV9-1A0A075B6T8 112 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 DCTN3O75935 186 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 DNAL4O96015 105 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 IFNA5P01569 189 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 HLA-DRB1P01911 266 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 RPS17P08708 135 aaKnown RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 PRB4P10163 310 aaPredicted RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 RPL5P46777 297 aaKnown RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 SNRPD2P62316 118 aaKnown RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 RHOBP62745 196 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 CCL20P78556 96 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 PRB3Q04118 309 aaPredicted RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 ITGB3BPQ13352 177 aaPredicted RBP0.5□□□□□ -2.33
NEDD4-211ENST00000514893 LPCAT3Q6P1A2 487 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 SFXN4Q6P4A7 337 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 MIR17HGQ75NE6 70 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 HIST3H2BBQ8N257 126 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 LINC00311Q8N616 119 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 SLC35B4Q969S0 331 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 PPP1R14BQ96C90 147 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 DCUN1D1Q96GG9 259 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 PPP1R2P1Q96PQ5 205 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 CYSTM1Q9H1C7 97 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 PRTFDC1Q9NRG1 225 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 FBXL12Q9NXK8 326 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 ERGIC3Q9Y282 383 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 KIAA2026Q5HYC2 2103 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 ECM29Q5VYK3 1845 aa0.5□□□□□ -2.33
NEDD4-211ENST00000514893 HECW2Q9P2P5 1572 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 TOPBP1Q92547 1522 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 SNAPC4Q5SXM2 1469 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 DCCP43146 1447 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 A0A087WX48 190 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 EXOC1LA0A1B0GW35 172 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 FAAHO00519 579 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 PIRO00625 290 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 SULT1B1O43704 296 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 AHSA1O95433 338 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 HTR1AP08908 422 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 SMIM17P0DL12 118 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 S100A4P26447 101 aaKnown RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 SSR2P43308 183 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 ZNF80P51504 273 aaPredicted RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 RPS20P60866 119 aaKnown RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 RAB5BP61020 215 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 RHEBQ15382 184 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 SPANXN5Q5MJ07 72 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 ALKAL1Q6UXT8 129 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 LRRC25Q8N386 305 aaPredicted RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 SIGLECL1Q8N7X8 197 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 GPR146Q96CH1 333 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 CCDC42Q96M95 316 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 OBSCN-AS1Q96MR7 158 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 CMSS1Q9BQ75 279 aaKnown RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 MRPL57Q9BQC6 102 aaKnown RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 CCDC90BQ9GZT6 254 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 OR51V1Q9H2C8 321 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 KIF13BQ9NQT8 1826 aa0.49□□□□□ -2.33
NEDD4-211ENST00000514893 BAZ2BQ9UIF8 2168 aaKnown RBP0.49□□□□□ -2.33
NEDD4-211ENST00000514893 WRNQ14191 1432 aaPredicted RBP eCLIP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 RIC1Q4ADV7 1423 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 STRCQ7RTU9 1775 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 TRBV6-8A0A0A6YYG3 113 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 CCDC160A6NGH7 325 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 OR4C46A6NHA9 309 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 C2orf70A6NJV1 201 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 SMIM23A6NLE4 172 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 HYPMO75409 117 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 KRT75O95678 551 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 CLPSP04118 112 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 IFNA16P05015 189 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 HIST1H1EP10412 219 aaKnown RBP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 RNASE3P12724 160 aaKnown RBP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 SULT1A1P50225 295 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 NKX2-5P52952 324 aaPredicted RBP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 PSME3P61289 254 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 TRAPPC5Q8IUR0 188 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 C20orf196Q8IYI0 205 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 CLECL1Q8IZS7 167 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 FAM19A2Q8N3H0 131 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 OR4D11Q8NGI4 311 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 PFN4Q8NHR9 129 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 H1FXQ92522 213 aaKnown RBP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 C8orf76Q96K31 380 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 C6orf62Q9GZU0 229 aaPredicted RBP0.48□□□□□ -2.33
NEDD4-211ENST00000514893 OSTCQ9NRP0 149 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 ACER3Q9NUN7 267 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 ANAPC1Q9H1A4 1944 aa0.48□□□□□ -2.33
NEDD4-211ENST00000514893 FREM1Q5H8C1 2179 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 DLG5Q8TDM6 1919 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 FAM236DA0A1B0GTK5 79 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 BUB1B-PAK6H3BSN5 160 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 M0R036 132 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 CHP2O43745 196 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 OR1I1O60431 355 aa0.47□□□□□ -2.33
NEDD4-211ENST00000514893 IFNA10P01566 189 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms