RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FCGR3BO75015 233 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 FBXO24O75426 580 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 CST7O76096 145 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 HRASP01112 189 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 HLA-DRB1P01911 266 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 OR9G9P0C7N8 305 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 CD28P10747 220 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 CNTFRP26992 372 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 SPCS3P61009 180 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 SLC35B1P78383 322 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 ARL16Q0P5N6 197 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 PJVKQ0ZLH3 352 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 PSG5Q15238 335 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 ATP6V1FQ16864 119 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 OR2B11Q5JQS5 317 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 PRR31Q5SQ13 230 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 PXDC1Q5TGL8 231 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 PSMG3Q9BT73 122 aaPredicted RBP6.55□□□□□ -1.36
CCL28-204ENST00000514421 SCRT1Q9BWW7 348 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 FBXL15Q9H469 300 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 LINC00527Q9UJ94 153 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 ZNF257Q9Y2Q1 563 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 TRAV1-1A0A0B4J248 108 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 TCRBV4S1A1TA0A5B7 111 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 PSMB11A5LHX3 300 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 C15orf61A6NNL5 157 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 INS-IGF2F8WCM5 200 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 FCN1O00602 326 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OPN1MWP04001 364 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 IGKV1-16P04430 117 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 IGF1P05019 195 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 CD5P06127 495 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OPN1MW2P0DN77 364 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OPN1MW3P0DN78 364 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 ATP6V0CP27449 155 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 ATP5IP56385 69 aaPredicted RBP6.54□□□□□ -1.36
CCL28-204ENST00000514421 ERVK-16P61578 105 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 PLGLAQ15195 96 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 ZNF329Q86UD4 541 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 CCDC28AQ8IWP9 274 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OR4X2Q8NGF9 303 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OR2G3Q8NGZ4 309 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OSR1Q8TAX0 266 aaPredicted RBP6.54□□□□□ -1.36
CCL28-204ENST00000514421 DTD1Q8TEA8 209 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 RHOVQ96L33 236 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 NOL4LQ96MY1 436 aaPredicted RBP6.54□□□□□ -1.36
CCL28-204ENST00000514421 LINC00052Q96N35 136 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 OR4C12Q96R67 309 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 CITED2Q99967 270 aaPredicted RBP6.54□□□□□ -1.36
CCL28-204ENST00000514421 GGACTQ9BVM4 153 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 TMEM140Q9NV12 185 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 BET1LQ9NYM9 111 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 METTL1Q9UBP6 276 aaKnown RBP6.54□□□□□ -1.36
CCL28-204ENST00000514421 ZNF580Q9UK33 172 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 TIMM9Q9Y5J7 89 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 NBEAL1Q6ZS30 2694 aa6.54□□□□□ -1.36
CCL28-204ENST00000514421 PLXNB1O43157 2135 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 SRRM4A7MD48 611 aaKnown RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 C15orf62A8K5M9 175 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 PRSS46E5RG02 174 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 FNDC10F2Z333 226 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 NXPH3O95157 252 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 CRYZL1O95825 349 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 CRYGBP07316 175 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 METTL15P1P0C7V9 234 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 IAPPP10997 89 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 CX3CL1P78423 397 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 SERF2P84101 59 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 TMEM267Q0VDI3 215 aaPredicted RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 CLINT1Q14677 625 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 TCTEX1D4Q5JR98 221 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 OR4A47Q6IF82 309 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 TEX38Q6PEX7 206 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 ZNF562Q6V9R5 426 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 Q6ZRG5 221 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 NDUFA11Q86Y39 141 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 TEX45Q8NA69 505 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 HSD17B11Q8NBQ5 300 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 LFNGQ8NES3 379 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 PINX1Q96BK5 328 aaKnown RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 CLCC1Q96S66 551 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 HSPB9Q9BQS6 159 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 QTRT1Q9BXR0 403 aaKnown RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 WDR61Q9GZS3 305 aaKnown RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 SMDT1Q9H4I9 107 aa6.53□□□□□ -1.36
CCL28-204ENST00000514421 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 TSSC4Q9Y5U2 329 aaPredicted RBP6.53□□□□□ -1.36
CCL28-204ENST00000514421 TMEM218A2RU14 115 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 H3BP45 60 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 UPK2O00526 184 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 SLC25A17O43808 307 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 SOX15O60248 233 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 IFNA5P01569 189 aa6.52□□□□□ -1.37
CCL28-204ENST00000514421 ELANEP08246 267 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms