RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 PLGRKTQ9HBL7 147 aa6.37□□□□□ -1.39
SH3D19-209ENST00000514013 FKBP14Q9NWM8 211 aa6.37□□□□□ -1.39
SH3D19-209ENST00000514013 RABAC1Q9UI14 185 aa6.37□□□□□ -1.39
SH3D19-209ENST00000514013 F11RQ9Y624 299 aaKnown RBP6.37□□□□□ -1.39
SH3D19-209ENST00000514013 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 TEX50A0A1B0GTY4 177 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 DENRO43583 198 aaKnown RBP6.36□□□□□ -1.39
SH3D19-209ENST00000514013 HIST1H1DP16402 221 aaKnown RBP6.36□□□□□ -1.39
SH3D19-209ENST00000514013 PAFAH1B2P68402 229 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 MRPS15P82914 257 aaKnown RBP6.36□□□□□ -1.39
SH3D19-209ENST00000514013 SPHARQ15513 63 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 RAB11BQ15907 218 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 POU2AF1Q16633 256 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 OGFRL1Q5TC84 451 aaPredicted RBP6.36□□□□□ -1.39
SH3D19-209ENST00000514013 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 Q6ZS49 121 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 UFD1Q92890 307 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 NXF2Q9GZY0 626 aaKnown RBP6.36□□□□□ -1.39
SH3D19-209ENST00000514013 C8orf4Q9NR00 106 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 PLCXD1Q9NUJ7 323 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 TMEM140Q9NV12 185 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 MDFICQ9P1T7 246 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 XCL2Q9UBD3 114 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 DKK2Q9UBU2 259 aa6.36□□□□□ -1.39
SH3D19-209ENST00000514013 LSM2Q9Y333 95 aaKnown RBP6.36□□□□□ -1.39
SH3D19-209ENST00000514013 I3L2K1 104 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 SPART-AS1P0CW21 52 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 TRAPPC2P0DI81 140 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 TRAPPC2BP0DI82 140 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 RPL11P62913 178 aaKnown RBP6.35□□□□□ -1.39
SH3D19-209ENST00000514013 RELQ04864 619 aaPredicted RBP6.35□□□□□ -1.39
SH3D19-209ENST00000514013 FAM222AQ5U5X8 452 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 ZNF705AQ6ZN79 300 aaPredicted RBP6.35□□□□□ -1.39
SH3D19-209ENST00000514013 TMEM91Q6ZNR0 172 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 SPAG16Q8N0X2 631 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 MS4A15Q8N5U1 240 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 OR10R2Q8NGX6 335 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 DCANP1Q8TF63 244 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 CCL28Q9NRJ3 127 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 NDUFA4L2Q9NRX3 87 aa6.35□□□□□ -1.39
SH3D19-209ENST00000514013 A0A1B0GU03 582 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 ZNF705FA8MVS1 300 aaPredicted RBP6.34□□□□□ -1.39
SH3D19-209ENST00000514013 SULT1C2O00338 296 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 ZNF705DP0CH99 300 aaPredicted RBP6.34□□□□□ -1.39
SH3D19-209ENST00000514013 ZNF705BP0CI00 300 aaPredicted RBP6.34□□□□□ -1.39
SH3D19-209ENST00000514013 CALRP27797 417 aaKnown RBP6.34□□□□□ -1.39
SH3D19-209ENST00000514013 AQP4P55087 323 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 FAM3BP58499 235 aaPredicted RBP6.34□□□□□ -1.39
SH3D19-209ENST00000514013 HES5Q5TA89 166 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 DUSP18Q8NEJ0 188 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 STXBP6Q8NFX7 210 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 SLC25A46Q96AG3 418 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 GRAMD2BQ96HH9 432 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 RAB40CQ96S21 281 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 HINT2Q9BX68 163 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 CCDC90BQ9GZT6 254 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 DCSTAMPQ9H295 470 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 VCXQ9H320 206 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 RNF167Q9H6Y7 350 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 NSG2Q9Y328 171 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 TMED3Q9Y3Q3 217 aa6.34□□□□□ -1.39
SH3D19-209ENST00000514013 CASQ2O14958 399 aaPredicted RBP6.33□□□□□ -1.4
SH3D19-209ENST00000514013 RBFOX2O43251 390 aaKnown RBP eCLIP6.33□□□□□ -1.4
SH3D19-209ENST00000514013 SLC22A5O76082 557 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 PTHLHP12272 177 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 NQO2P16083 231 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 OR10A3P58181 314 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 TAS2R31P59538 309 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 OR1L8Q8NGR8 309 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 LSM10Q969L4 123 aaKnown RBP6.33□□□□□ -1.4
SH3D19-209ENST00000514013 NIPSNAP3BQ9BS92 247 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 SCN3BQ9NY72 215 aa6.33□□□□□ -1.4
SH3D19-209ENST00000514013 PUS1Q9Y606 427 aaKnown RBP eCLIP6.33□□□□□ -1.4
SH3D19-209ENST00000514013 SMIM30A4D0T7 59 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 CYB5BO43169 146 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 RGS10O43665 173 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 MT-CO2P00403 227 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 CD5P06127 495 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 EIF4EP06730 217 aaKnown RBP6.32□□□□□ -1.4
SH3D19-209ENST00000514013 DTYMKP23919 212 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 TALDO1P37837 337 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 MFAP4P55083 255 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 DEFB1P60022 68 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 DLK1P80370 383 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 FABP5Q01469 135 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 SSX1Q16384 188 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 PSMG4Q5JS54 123 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 THOC7Q6I9Y2 204 aaKnown RBP6.32□□□□□ -1.4
SH3D19-209ENST00000514013 HSD17B13Q7Z5P4 300 aaPredicted RBP6.32□□□□□ -1.4
SH3D19-209ENST00000514013 NUDCD2Q8WVJ2 157 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 NEU1Q99519 415 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 GINS3Q9BRX5 216 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 ATG101Q9BSB4 218 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 RAB22AQ9UL26 194 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
SH3D19-209ENST00000514013 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
SH3D19-209ENST00000514013 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
SH3D19-209ENST00000514013 H3BMM0 161 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms