RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TMEM56Q96MV1 263 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 ATG5Q9H1Y0 275 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 TMEM231Q9H6L2 316 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 C8orf4Q9NR00 106 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 MYCBP2O75592 4640 aa7.78□□□□□ -1.16
DDX41-216ENST00000513562 PTGES3LE9PB15 166 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 PDCD5O14737 125 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 GNG7O60262 68 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 MT-CO2P00403 227 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 IGHV3-48P01763 117 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 HSMCR30P0CW71 290 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 FGF9P31371 208 aaPredicted RBP7.77□□□□□ -1.17
DDX41-216ENST00000513562 GNG2P59768 71 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 AADACL3Q5VUY0 350 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 ZNF818PQ6ZRF7 136 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 ZNF114Q8NC26 417 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 MISP3Q96FF7 219 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 NEU1Q99519 415 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 C1QTNF4Q9BXJ3 329 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 SLC5A7Q9GZV3 580 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 RNF167Q9H6Y7 350 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 ACOT13Q9NPJ3 140 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 NSG2Q9Y328 171 aa7.77□□□□□ -1.17
DDX41-216ENST00000513562 PUS1Q9Y606 427 aaKnown RBP eCLIP7.77□□□□□ -1.17
DDX41-216ENST00000513562 TRAV1-2A0A0B4J238 106 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 A0A1B0GU03 582 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 A0A1W2PS18 150 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 TMEM189A5PLL7 270 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 DBX1A6NMT0 343 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 PTHLHP12272 177 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 ARPC4P59998 168 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 MLLT11Q13015 90 aaPredicted RBP7.76□□□□□ -1.17
DDX41-216ENST00000513562 ZNF705AQ6ZN79 300 aaPredicted RBP7.76□□□□□ -1.17
DDX41-216ENST00000513562 ZNF600Q6ZNG1 722 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 RAB40CQ96S21 281 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 XCL2Q9UBD3 114 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 PRNDQ9UKY0 176 aa7.76□□□□□ -1.17
DDX41-216ENST00000513562 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 TEX48A0A1B0GUV7 120 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 ZNF705FA8MVS1 300 aaPredicted RBP7.75□□□□□ -1.17
DDX41-216ENST00000513562 SNAPC5O75971 98 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 KRASP01116 189 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 ZNF705DP0CH99 300 aaPredicted RBP7.75□□□□□ -1.17
DDX41-216ENST00000513562 ZNF705BP0CI00 300 aaPredicted RBP7.75□□□□□ -1.17
DDX41-216ENST00000513562 P2RY1P47900 373 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 EMP1P54849 157 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 FXYD4P59646 89 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 NUTF2P61970 127 aaKnown RBP7.75□□□□□ -1.17
DDX41-216ENST00000513562 KCTD21Q4G0X4 260 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 TMEM88Q6PEY1 159 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 BEST4Q8NFU0 473 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 PINX1Q96BK5 328 aaKnown RBP7.75□□□□□ -1.17
DDX41-216ENST00000513562 YTHDF1Q9BYJ9 559 aaKnown RBP7.75□□□□□ -1.17
DDX41-216ENST00000513562 CCDC90BQ9GZT6 254 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 FKBP11Q9NYL4 201 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 DKK2Q9UBU2 259 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 TMED3Q9Y3Q3 217 aa7.75□□□□□ -1.17
DDX41-216ENST00000513562 EPM2AB3EWF7 344 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 CASQ2O14958 399 aaPredicted RBP7.74□□□□□ -1.17
DDX41-216ENST00000513562 SCGNO76038 276 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 RAB3BP20337 219 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 NPPCP23582 126 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 F2RP25116 425 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 CRYBB3P26998 211 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 G6PCP35575 357 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 NPBWR1P48145 328 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 OXA1LQ15070 435 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 PSMG4Q5JS54 123 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 TMEM17Q86X19 198 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 FCAMRQ8WWV6 532 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 MOB3AQ96BX8 217 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
DDX41-216ENST00000513562 HELTA6NFD8 242 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 H3BMM0 161 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 RLN1P04808 185 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 INAFM2P0DMQ5 153 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 HTN3P15516 51 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 MYL9P24844 172 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 GNRHRP30968 328 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 TPRA1Q86W33 373 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 HOGA1Q86XE5 327 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 ZNRF2Q8NHG8 242 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 METTL26Q96S19 204 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 TSC22D3Q99576 134 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 MGLLQ99685 303 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 SCN3BQ9NY72 215 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 RFNGQ9Y644 331 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 AGRNO00468 2067 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
DDX41-216ENST00000513562 TMEM50AO95807 157 aa7.72□□□□□ -1.17
DDX41-216ENST00000513562 LPAR6P43657 344 aa7.72□□□□□ -1.17
DDX41-216ENST00000513562 KRTAP10-2P60368 255 aa7.72□□□□□ -1.17
DDX41-216ENST00000513562 PRCDQ00LT1 54 aa7.72□□□□□ -1.17
DDX41-216ENST00000513562 C15orf53Q8NAA6 179 aa7.72□□□□□ -1.17
DDX41-216ENST00000513562 BORCS5Q969J3 196 aa7.72□□□□□ -1.17
DDX41-216ENST00000513562 PGLYRP1O75594 196 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms