RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IGKV1D-12P01611 117 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-211ENST00000513346 SMIM17P0DL12 118 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 IGFBP2P18065 325 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF826PQ6ZT77 177 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 MIR17HGQ75NE6 70 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 GAGE12BA1L429 117 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 HIGD1CA8MV81 97 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 LILRA1O75019 489 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 MPV17P39210 176 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 LGALS7P47929 136 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 Q0VG73 95 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF146Q15072 292 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 GCSAMLQ5JQS6 135 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 PSMG4Q5JS54 123 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
TCOF1-211ENST00000513346 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 COL4A6Q14031 1691 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 A0A1B0GUS0 222 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 TMEM8BA6NDV4 472 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 RPL8P62917 257 aaKnown RBP9.43□□□□□ -0.9
TCOF1-211ENST00000513346 PLAURQ03405 335 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 CFHR1Q03591 330 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 IMMP1LQ96LU5 166 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 PKDREJQ9NTG1 2253 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 A0A1B0GWB2 263 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 PEX7O00628 323 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 CA1P00915 261 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-211ENST00000513346 CDKN1AP38936 164 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 HOXA4Q00056 320 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-211ENST00000513346 SLC25A53Q5H9E4 307 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 TMUB1Q9BVT8 246 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 CLEC5AQ9NY25 188 aa9.43□□□□□ -0.9
TCOF1-211ENST00000513346 TECTAO75443 2155 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 C12orf77C9JDV5 145 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 TWIST1Q15672 202 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 TMEM14EPQ6UXP3 125 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 OR4X2Q8NGF9 303 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 FAM222BQ8WU58 562 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 SSBP4Q9BWG4 385 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-211ENST00000513346 C9JCJ5 164 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 CELA3AP09093 270 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 DEPPQ9NTK1 212 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 JPT1Q9UK76 154 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 IGLC3P0DOY3 106 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 PTGDSP41222 190 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
TCOF1-211ENST00000513346 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
TCOF1-211ENST00000513346 C1QTNF5Q9BXJ0 243 aa9.42□□□□□ -0.9
TCOF1-211ENST00000513346 RBFOX2O43251 390 aaKnown RBP eCLIP9.41□□□□□ -0.9
TCOF1-211ENST00000513346 REG1BP48304 166 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 KLHDC3Q9BQ90 382 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 RPP21Q9H633 154 aaKnown RBP9.41□□□□□ -0.9
TCOF1-211ENST00000513346 CLEC2AQ6UVW9 174 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 Q6ZWC4 215 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 KLF14Q8TD94 323 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF837Q96EG3 531 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-211ENST00000513346 IGLV3-12A0A075B6K2 115 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 TM4SF20Q53R12 229 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 NEUROG1Q92886 237 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
TCOF1-211ENST00000513346 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 LY96Q9Y6Y9 160 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 CEP295Q9C0D2 2601 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 CD5LO43866 347 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 TCF24Q7RTU0 167 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 MRPL27Q9P0M9 148 aaKnown RBP9.41□□□□□ -0.9
TCOF1-211ENST00000513346 RAXQ9Y2V3 346 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 RNF115Q9Y4L5 304 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 NOTCH4Q99466 2003 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 THADAQ6YHU6 1953 aa9.41□□□□□ -0.9
TCOF1-211ENST00000513346 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 SH2D7A6NKC9 451 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-211ENST00000513346 TIMM23BQ5SRD1 257 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 CCDC144NLQ6NUI1 221 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 RBPMS2Q6ZRY4 209 aaKnown RBP9.4□□□□□ -0.9
TCOF1-211ENST00000513346 Q6ZT83 130 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 TTC9CQ8N5M4 171 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 GCSAMQ8N6F7 178 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 TEX29Q8N6K0 151 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF714Q96N38 554 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 TANC1Q9C0D5 1861 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 A0A1B0GUT8 65 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 IL4P05112 153 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 EFNB3Q15768 340 aa9.4□□□□□ -0.9
TCOF1-211ENST00000513346 IGKV1-5P01602 117 aa9.4□□□□□ -0.91
TCOF1-211ENST00000513346 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.91
TCOF1-211ENST00000513346 CX3CL1P78423 397 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms