RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 URGCP-MRPS24S4R325 110 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 A0A1W2PPI3 338 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 RAB7AP51149 207 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 PIFOQ8TCI5 191 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 RTN4IP1Q8WWV3 396 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-209ENST00000513148 TAF15Q92804 592 aaKnown RBP eCLIP13.23□□□□□ -0.29
HMGCL-209ENST00000513148 ST6GALNAC6Q969X2 333 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-209ENST00000513148 RBM7Q9Y580 266 aaKnown RBP13.23□□□□□ -0.29
HMGCL-209ENST00000513148 FBN1P35555 2871 aaKnown RBP13.23□□□□□ -0.29
HMGCL-209ENST00000513148 IGHV3-72A0A0B4J1Y9 119 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 ST8SIA3O43173 380 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 DIRAS3O95661 229 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 RNASE1P07998 156 aaKnown RBP13.22□□□□□ -0.29
HMGCL-209ENST00000513148 RPL39P5Q59GN2 51 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 TMEM182Q6ZP80 229 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-209ENST00000513148 MOB3BQ86TA1 216 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 TMEM219Q86XT9 240 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 H1FOOQ8IZA3 346 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-209ENST00000513148 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 TMEM86BQ8N661 226 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 DRAM1Q8N682 238 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 SLC35G3Q8N808 338 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 SH3BGRL3Q9H299 93 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 EHFQ9NZC4 300 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 ATRQ13535 2644 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 IGHV1-3A0A0C4DH29 117 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 RPLP1P05386 114 aaKnown RBP13.22□□□□□ -0.29
HMGCL-209ENST00000513148 CTXN2P0C2S0 81 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 BRS3P32247 399 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 ZNF816Q0VGE8 651 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-209ENST00000513148 KRTAP24-1Q3LI83 254 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 OR4X1Q8NH49 305 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 TMEM18Q96B42 140 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 AGMATQ9BSE5 352 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 OR2D2Q9H210 308 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 NECAP2Q9NVZ3 263 aa13.22□□□□□ -0.29
HMGCL-209ENST00000513148 FAM181BA6NEQ2 426 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 RAB29O14966 203 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 PITX3O75364 302 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 G0S2P27469 103 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 ZNF137PP52743 207 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 CCL20P78556 96 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 OR2G3Q8NGZ4 309 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 BSCL2Q96G97 398 aaPredicted RBP13.21□□□□□ -0.29
HMGCL-209ENST00000513148 ATG101Q9BSB4 218 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 TCF19Q9Y242 345 aa13.21□□□□□ -0.29
HMGCL-209ENST00000513148 ITGB1BP1O14713 200 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 GPR12P47775 334 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.2□□□□□ -0.3
HMGCL-209ENST00000513148 P2RX4Q99571 388 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 DYNLT3P51808 116 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 HES1Q14469 280 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 ZNF833PQ6ZTB9 187 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 CFHR4Q92496 578 aa13.2□□□□□ -0.3
HMGCL-209ENST00000513148 MRPL20Q9BYC9 149 aaKnown RBP13.2□□□□□ -0.3
HMGCL-209ENST00000513148 TMEM187Q14656 261 aa13.19□□□□□ -0.3
HMGCL-209ENST00000513148 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
HMGCL-209ENST00000513148 FAM216AQ8WUB2 273 aa13.19□□□□□ -0.3
HMGCL-209ENST00000513148 S1PR3Q99500 378 aa13.19□□□□□ -0.3
HMGCL-209ENST00000513148 C11orf1Q9H5F2 150 aa13.19□□□□□ -0.3
HMGCL-209ENST00000513148 OR2W1Q9Y3N9 320 aa13.19□□□□□ -0.3
HMGCL-209ENST00000513148 LOC102723971A0A1B0GUV8 181 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 CHST1O43916 411 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 IGKV1D-33P01593 117 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 IGKV1-33P01594 117 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 ATP6V0CP27449 155 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 PMS2P11Q13670 270 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 COTL1Q14019 142 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 IGKV1D-13A0A0B4J2D9 117 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 RNF212BA8MTL3 300 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 ZNF705GA8MUZ8 300 aaPredicted RBP13.18□□□□□ -0.3
HMGCL-209ENST00000513148 IGKV1-13P0DP09 117 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 AADACP22760 399 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 EWSR1Q01844 656 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMGCL-209ENST00000513148 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 NAA60Q9H7X0 242 aa13.18□□□□□ -0.3
HMGCL-209ENST00000513148 A6NDX4 124 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 FAM106CPP0CH98 169 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 FAM3BP58499 235 aaPredicted RBP13.17□□□□□ -0.3
HMGCL-209ENST00000513148 FXYD4P59646 89 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 RPL23AP62750 156 aaKnown RBP13.17□□□□□ -0.3
HMGCL-209ENST00000513148 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
HMGCL-209ENST00000513148 FAM90A2PQ658T7 463 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 LGI3Q8N145 548 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 IMMP2LQ96T52 175 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 C19orf24Q9BVV8 132 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 M0R1X1 148 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 CDS2O95674 445 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 SCGB1D2O95969 90 aa13.17□□□□□ -0.3
HMGCL-209ENST00000513148 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms