RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CST6Q15828 149 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 PNLIPRP3Q17RR3 467 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRICKLE4Q2TBC4 344 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 TCTEX1D4Q5JR98 221 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 DMRTA1Q5VZB9 504 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 DPPA3Q6W0C5 159 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 Q6ZS92 163 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ACOT7LQ6ZUV0 252 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRSS41Q7RTY9 318 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 GTSCR1Q86UQ5 136 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 BPIFA4PQ86YQ2 179 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 SIAH3Q8IW03 269 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 KIR2DL5AQ8N109 375 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR6V1Q8N148 313 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 GBGT1Q8N5D6 347 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ANKRD29Q8N6D5 301 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 TSKUQ8WUA8 353 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 CDS1Q92903 461 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 NRIP2Q9BQI9 281 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZMAT4Q9H898 229 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 DNAJB12Q9NXW2 375 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPANXCQ9NY87 97 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 CNIH4Q9P003 139 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 PXMP4Q9Y6I8 212 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMED7-TICAM2A0A0A6YYA0 188 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRAV8-6A0A0B4J262 113 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRAV39A0A0B4J263 110 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1W2PP55 124 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM30CPA0ZSE6 113 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 C7orf77A4D0Y5 90 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRSS37A4D1T9 235 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 FBLL1A6NHQ2 334 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 M0QYG6 137 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 CD5LO43866 347 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 RHBDL1O75783 438 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 DUSP14O95147 198 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 MPZL1O95297 269 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 LGALS1P09382 135 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 FGF7P21781 194 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ACHEP22303 614 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 CA7P43166 264 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 KIR2DS2P43631 304 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 RND2P52198 227 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ATP5IP56385 69 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 RPS13P62277 151 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 GNG3P63215 75 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 DEFB109BQ30KR1 87 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 SNAI3Q3KNW1 292 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 C1orf100Q5SVJ3 147 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 FAM90A2PQ658T7 463 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRPL54Q6P161 138 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC48A1Q6P1K1 146 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF562Q6V9R5 426 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 PDPNQ86YL7 162 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 LRTM2Q8N967 370 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR9G4Q8NGQ1 327 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR51H1Q8NH63 302 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 OSR1Q8TAX0 266 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ABHD3Q8WU67 409 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCL17Q92583 94 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ARPC1AQ92747 370 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPACA9Q96E40 222 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 OXGR1Q96P68 337 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 F2RL3Q96RI0 385 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ANAPC13Q9BS18 74 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 MCRIP2Q9BUT9 160 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 FSCN3Q9NQT6 498 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 YAE1D1Q9NRH1 226 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 UQCC1Q9NVA1 299 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 V9GY05 133 aa1.38□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV3-7A0A075B6H7 116 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 LOC100289279A0A1B0GTE1 492 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1B0GU03 582 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1B0GV72 72 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CLPSL1A2RUU4 121 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 TLCD2A6NGC4 264 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FAM90A27PA6NNH2 459 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C21orf140B9A014 251 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SOCS6O14544 535 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CHST1O43916 411 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF253O75346 499 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGHMP01871 453 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MT-ND6P03923 174 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 THBDP07204 575 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CTSDP07339 412 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SMIM13P0DJ93 91 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 HOXA5P20719 270 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 UBE2AP49459 152 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CEBPDP49716 269 aaPredicted RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 FHITP49789 147 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CLDN2P57739 230 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 CKS1BP61024 79 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC38A11Q08AI6 406 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 GPR18Q14330 331 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 C2orf83Q53S99 150 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 SPANXN5Q5MJ07 72 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 XP32Q5T750 250 aa1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 MBNL2Q5VZF2 373 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-211ENST00000512009 DEGS2Q6QHC5 323 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms