RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ADRA2AP08913 450 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 LGALS1P09382 135 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 SFTA3P0C7M3 94 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 GABRA3P34903 492 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 POLR2JP52435 117 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 RND3P61587 244 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 C1DQ13901 141 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 IGFBP7Q16270 282 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 OLFML2AQ68BL7 652 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 PVRIGQ6DKI7 326 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM179BQ7Z7N9 219 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM219Q86XT9 240 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 C1orf158Q8N1D5 194 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 LINC00471Q8N535 108 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 SYT8Q8NBV8 401 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 PHLDA1Q8WV24 401 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNRF4Q8WWF5 429 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 PP6455Q8WZ26 134 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 NOX3Q9HBY0 568 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 NDUFB11Q9NX14 153 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 CACFD1Q9UGQ2 172 aa4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 NUP214P35658 2090 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC11-208ENST00000511955 C7orf77A4D0Y5 90 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 FAM229AH3BQW9 127 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SLC17A2O00624 439 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BKO60814 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 C1QL1O75973 258 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 CXorf1O96002 111 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BJP06899 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 CCL3P10147 92 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BOP23527 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BBP33778 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 KIR2DS2P43631 304 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 GPM6AP51674 278 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 CRISP3P54108 245 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BDP58876 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BCP62807 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SLC38A11Q08AI6 406 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST2H2BEQ16778 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 FAM201AQ5SY85 155 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SLC35E4Q6ICL7 350 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 FBXW12Q6X9E4 464 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 STAC2Q6ZMT1 411 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF440Q8IYI8 595 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF843Q8N446 348 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SLC35G3Q8N808 338 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR2T6Q8NHC8 308 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BHQ93079 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SLC25A38Q96DW6 304 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BNQ99877 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HIST1H2BMQ99879 126 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SPATA25Q9BR10 227 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 TMEM147Q9BVK8 224 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 C19orf24Q9BVV8 132 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 MOB1AQ9H8S9 216 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 EDA2RQ9HAV5 297 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR5AC2Q9NZP5 309 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF256Q9Y2P7 627 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 KCNE3Q9Y6H6 103 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 USP9XQ93008 2570 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ADGRG4Q8IZF6 3080 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 A0A087WZ39 114 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 PINLYPA6NC86 204 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 RIIAD1A6NNX1 92 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SNRPGP15A8MWD9 76 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 CREBL2O60519 120 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 NPIPB7O75200 414 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR12D1P0DN82 309 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 PRSS3P35030 304 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 DAPP51397 102 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 RND2P52198 227 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SRSF3P84103 164 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 PLGLB1Q02325 96 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ZNF345Q14585 488 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR7A5Q15622 319 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 PAGE3Q5JUK9 113 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 LYRM7Q5U5X0 104 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 GFI1BQ5VTD9 330 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 LYPD4Q6UWN0 246 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 KCNRGQ8N5I3 272 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR1J1Q8NGS3 322 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 OR52N5Q8NH56 324 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SSC4DQ8WTU2 575 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 YPEL4Q96NS1 127 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 AP1S3Q96PC3 154 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 MIEN1Q9BRT3 115 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 DEPPQ9NTK1 212 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 TXNL4BQ9NX01 149 aaKnown RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SOX21Q9Y651 276 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 HECTD1Q9ULT8 2610 aa4.05□□□□□ -1.76
TRAPPC11-208ENST00000511955 SAA2-SAA4A0A096LPE2 208 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 TRAV8-4A0A0B4J246 113 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 TRAV17A0A0B4J275 112 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 FAM183AA6NL82 134 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 F5H5P2 479 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 NDUFB8O95169 186 aa4.04□□□□□ -1.76
TRAPPC11-208ENST00000511955 IL5P05113 134 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 1380.1 ms