RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CBLN3Q6UW01 205 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 GLIPR1L1Q6UWM5 242 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 MRPL52Q86TS9 123 aaKnown RBP4.08□□□□□ -1.76
GYPB-212ENST00000511198 OR5AS1Q8N127 324 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 GATSQ8NAP1 163 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 BHLHE23Q8NDY6 225 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 OR13C9Q8NGT0 318 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 MFSD8Q8NHS3 518 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 HPSE2Q8WWQ2 592 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 TMEM234Q8WY98 164 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 SLAMF6Q96DU3 332 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 TVP23CQ96ET8 276 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 ADAT3Q96EY9 351 aaPredicted RBP4.08□□□□□ -1.76
GYPB-212ENST00000511198 SSX3Q99909 188 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 OPRPNQ99935 248 aaPredicted RBP4.08□□□□□ -1.76
GYPB-212ENST00000511198 TBL1XR1Q9BZK7 514 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 TMEM242Q9NWH2 141 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 GSKIPQ9P0R6 139 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 DOK5Q9P104 306 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 KCNIP3Q9Y2W7 256 aa4.08□□□□□ -1.76
GYPB-212ENST00000511198 LSM5Q9Y4Y9 91 aaKnown RBP4.08□□□□□ -1.76
GYPB-212ENST00000511198 TSSC4Q9Y5U2 329 aaPredicted RBP4.08□□□□□ -1.76
GYPB-212ENST00000511198 PIGBOS1A0A0B4J2F0 54 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 DUXBA0A1W2PPF3 345 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 FAM230AA0A1W2PPH8 454 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 RBFOX3A6NFN3 312 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 GJE1A6NN92 205 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 ZNF726A6NNF4 738 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 EPM2AB3EWF7 344 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 FTCDNL1E5RQL4 147 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 H3BQ15 152 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 H3BUX3 64 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SOCS1O15524 211 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 ST8SIA3O43173 380 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SYNGR1O43759 233 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BKO60814 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 CRTAPO75718 401 aaPredicted RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 YIF1AO95070 293 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 ARG1P05089 322 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BJP06899 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SRP19P09132 144 aaKnown RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 OR5AC1P0C628 307 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 NR2C1P13056 603 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 RAB4AP20338 218 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BOP23527 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 DTYMKP23919 212 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BBP33778 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 TAGLN2P37802 199 aaKnown RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 OR3A4PP47883 348 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 RND2P52198 227 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 NDUFA6P56556 154 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 TMEM50BP56557 158 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BDP58876 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 UBE2KP61086 200 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BCP62807 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 GRB2P62993 217 aaKnown RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 H3F3AP84243 136 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 BAXQ07812 192 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 UBE2V1Q13404 147 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 ELOBQ15370 118 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 UBE2V2Q15819 145 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST2H2BEQ16778 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 KHDC3LQ587J8 217 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 SLC16A14Q7RTX9 510 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 LGI3Q8N145 548 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 CCDC71LQ8N9Z2 235 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 OR10D4PQ8NGN7 298 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 FAM213BQ8TBF2 198 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 RNASEH2CQ8TDP1 164 aaKnown RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 ITLN1Q8WWA0 313 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 ST8SIA1Q92185 356 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BHQ93079 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SLC25A36Q96CQ1 311 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 C10orf35Q96D05 121 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 GNPNAT1Q96EK6 184 aaPredicted RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 ARHGAP5-AS1Q96IT6 56 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 POM121L2Q96KW2 1035 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 LINC00479Q96M42 142 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 NKX3-1Q99801 234 aaPredicted RBP4.07□□□□□ -1.76
GYPB-212ENST00000511198 SPIN2AQ99865 258 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BNQ99877 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 HIST1H2BMQ99879 126 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SPIN2BQ9BPZ2 258 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 NIPSNAP3BQ9BS92 247 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 NICN1Q9BSH3 213 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 C20orf24Q9BUV8 137 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 PECRQ9BY49 303 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SLC25A31Q9H0C2 315 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 NAA60Q9H7X0 242 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 PITPNC1Q9UKF7 332 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 FBXO7Q9Y3I1 522 aa4.07□□□□□ -1.76
GYPB-212ENST00000511198 SORL1Q92673 2214 aa4.06□□□□□ -1.76
GYPB-212ENST00000511198 IGLV3-9A0A075B6K5 115 aa4.06□□□□□ -1.76
GYPB-212ENST00000511198 TRBV24-1A0A075B6N3 115 aa4.06□□□□□ -1.76
GYPB-212ENST00000511198 A0A087X0M5 115 aa4.06□□□□□ -1.76
GYPB-212ENST00000511198 TRAV1-1A0A0B4J248 108 aa4.06□□□□□ -1.76
GYPB-212ENST00000511198 A0A1B0GV90 55 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms