RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 DUX3Q96PT4 197 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 RNF5Q99942 180 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 SULT1A1P50225 295 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 RAB11AP62491 216 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 OR1S2Q8NGQ3 325 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 OR4A5Q8NH83 315 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 TMED6Q8WW62 240 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 SLC25A31Q9H0C2 315 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 C11orf1Q9H5F2 150 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 GNB4Q9HAV0 340 aa6.33□□□□□ -1.4
SMAD1-209ENST00000511125 HLA-DRB1P01911 266 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 ACSM6Q6P461 480 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 OR5R1Q8NH85 324 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 CIB3Q96Q77 187 aaPredicted RBP6.32□□□□□ -1.4
SMAD1-209ENST00000511125 DOK5Q9P104 306 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 ZNF257Q9Y2Q1 563 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 U3KQ87 197 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 TRGV3P03979 118 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 HTR2BP41595 481 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 RND2P52198 227 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 TPPP2P59282 170 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 BPIFB3P59826 476 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 ARPC5LQ9BPX5 153 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 PRSS22Q9GZN4 317 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 NPFFR1Q9GZQ6 430 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 FBXL7Q9UJT9 491 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 TENM1Q9UKZ4 2725 aa6.32□□□□□ -1.4
SMAD1-209ENST00000511125 IGHV3OR16-13A0A075B7E8 117 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 IGHV3-74A0A0B4J1X5 117 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 OR2T8A6NH00 312 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 HMSDA8MTL9 139 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 YIF1AO95070 293 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 FHITP49789 147 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 RHOGP84095 191 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 GCSAMLQ5JQS6 135 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 TMEM14EPQ6UXP3 125 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 Q6ZSV7 163 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 C18orf65Q6ZTR6 163 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 SGMS2Q8NHU3 365 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 SLC25A32Q9H2D1 315 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 ZFP57Q9NU63 452 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 IGHV3-49A0A0A0MS15 119 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 ZNF207O43670 478 aaKnown RBP6.31□□□□□ -1.4
SMAD1-209ENST00000511125 FGF7P21781 194 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 ZNF90Q03938 601 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 C15orf32Q32M92 178 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 Q56UQ5 140 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 TMEM182Q6ZP80 229 aaPredicted RBP6.31□□□□□ -1.4
SMAD1-209ENST00000511125 C9orf139Q6ZV77 190 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 KCNRGQ8N5I3 272 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 AQP10Q96PS8 301 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 ZNF702PQ9H963 129 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 ZFP92A6NM28 416 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 CRLF1O75462 422 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 RPLP1P05386 114 aaKnown RBP6.31□□□□□ -1.4
SMAD1-209ENST00000511125 CTRB1P17538 263 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 SUB1P53999 127 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMAD1-209ENST00000511125 GAMTQ14353 236 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 DEFB136Q30KP8 78 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 CTRB2Q6GPI1 263 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 TMEM65Q6PI78 240 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 CLEC19AQ6UXS0 136 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 STPG2Q8N412 459 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 SCARB1Q8WTV0 552 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 FANCD2OSQ96PS1 177 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 F11RQ9Y624 299 aaKnown RBP6.31□□□□□ -1.4
SMAD1-209ENST00000511125 COL6A5A8TX70 2615 aa6.31□□□□□ -1.4
SMAD1-209ENST00000511125 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
SMAD1-209ENST00000511125 PMS2P5A8MQ11 134 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 PPP5D1E7EU14 171 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 FGF16O43320 207 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 TRBV12-3P01733 135 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 MDKP21741 143 aaPredicted RBP6.3□□□□□ -1.4
SMAD1-209ENST00000511125 GPR183P32249 361 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 UBA52P62987 128 aaKnown RBP6.3□□□□□ -1.4
SMAD1-209ENST00000511125 HBG1P69891 147 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 HBG2P69892 147 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 RPP30P78346 268 aaKnown RBP6.3□□□□□ -1.4
SMAD1-209ENST00000511125 SCGB1C1Q8TD33 95 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 PBDC1Q9BVG4 233 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 CYTL1Q9NRR1 136 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 UQCC1Q9NVA1 299 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 A0A0D9SG52 128 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 AP4M1O00189 453 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 BCL2L11O43521 198 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 IFNA5P01569 189 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 IGHG2P01859 326 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 FAM157CP0CG43 387 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 MIC13Q5XKP0 118 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 BTNL8Q6UX41 500 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 STAB1Q9NY15 2570 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 IGKV1OR2-108A0A075B7D4 117 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 TCF21O43680 179 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 CLEC3BP05452 202 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 LYL1P12980 280 aa6.3□□□□□ -1.4
SMAD1-209ENST00000511125 FOSL1P15407 271 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms