RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 CTSGP08311 255 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 GP9P14770 177 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 EDN2P20800 178 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 CCR6P51684 374 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 SRPXP78539 464 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 RBMS2Q15434 407 aaKnown RBP8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 ANKRD55Q3KP44 614 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 FAM106AQ4KMX7 169 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 TRIQKQ629K1 86 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 PLET1Q6UQ28 207 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 UNQ9165/PRO28630Q6UXU0 137 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 TMED4Q7Z7H5 227 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 LGI3Q8N145 548 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 Q8N1Y9 231 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 BSCL2Q96G97 398 aaPredicted RBP8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 CHRDL1Q9BU40 450 aa8.9□□□□□ -0.98
HMGXB3-203ENST00000510472 PITX3O75364 302 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 SFT2D2O95562 160 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 MT-CO2P00403 227 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 C8orf88P0DMB2 117 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 ANXA3P12429 323 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 FOLR2P14207 255 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 CBLN1P23435 193 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 PPP1R1AQ13522 171 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 DCTN2Q13561 401 aaKnown RBP8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 DEFB114Q30KQ6 69 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 SPSB3Q6PJ21 355 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 OR2K2Q8NGT1 345 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 TXN2Q99757 166 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 C7orf50Q9BRJ6 194 aaKnown RBP8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 ZC4H2Q9NQZ6 224 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 CACFD1Q9UGQ2 172 aa8.89□□□□□ -0.99
HMGXB3-203ENST00000510472 A0A1B0GU03 582 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 IZUMO1RA6ND01 250 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 OR2T8A6NH00 312 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 ZNF785A8K8V0 405 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 SULT1A3P0DMM9 295 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 SULT1A4P0DMN0 295 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 SNCAP37840 140 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 MFAP4P55083 255 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 ELLP55199 621 aaPredicted RBP8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 UBE2MP61081 183 aaKnown RBP8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 CENPSQ8N2Z9 138 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 RNASE11Q8TAA1 199 aaKnown RBP8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 TMEM170AQ8WVE7 144 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 MISP3Q96FF7 219 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 PDCD10Q9BUL8 212 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 FNDC4Q9H6D8 234 aaPredicted RBP8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 GAR1Q9NY12 217 aaKnown RBP8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 HSPB7Q9UBY9 170 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 FLVCR2Q9UPI3 526 aa8.88□□□□□ -0.99
HMGXB3-203ENST00000510472 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 IGHV3-35A0A0C4DH35 117 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 LINC00854A0A1B0GVQ3 168 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 ZNF320A2RRD8 509 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 NDUFA4O00483 81 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 SLC25A6P12236 298 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 INPP1P49441 399 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 HOXA1P49639 335 aaPredicted RBP8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 TNFRSF9Q07011 255 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 SMCO1Q147U7 214 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 MLANAQ16655 118 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 CD300EQ496F6 205 aaPredicted RBP8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 TM4SF20Q53R12 229 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 C2orf83Q53S99 150 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 TMEM190Q8WZ59 177 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 CCDC32Q9BV29 185 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 TECRQ9NZ01 308 aaKnown RBP8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 MRPL36Q9P0J6 103 aaKnown RBP8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 SMAD5-AS1Q9Y6J3 95 aa8.87□□□□□ -0.99
HMGXB3-203ENST00000510472 C9orf170A2RU37 121 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 CENPXA8MT69 81 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 A8MZ25 164 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 K7EMT4 169 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 CORTO00230 105 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 LY86O95711 162 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 IGHV3-48P01763 117 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 VAMP1P23763 118 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 HTR2BP41595 481 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 Q56UQ5 140 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 LCN12Q6JVE5 192 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 C11orf87Q6NUJ2 197 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 UXS1Q8NBZ7 420 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 CACNG8Q8WXS5 425 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 MARC2Q969Z3 335 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 MRPL27Q9P0M9 148 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 MLXQ9UH92 298 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 UFC1Q9Y3C8 167 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 TMED3Q9Y3Q3 217 aa8.86□□□□□ -0.99
HMGXB3-203ENST00000510472 CEBPZOSA8MTT3 80 aa8.85□□□□□ -0.99
HMGXB3-203ENST00000510472 NUPL2O15504 423 aaKnown RBP8.85□□□□□ -0.99
HMGXB3-203ENST00000510472 LYRM1O43325 122 aa8.85□□□□□ -0.99
HMGXB3-203ENST00000510472 TMEM50AO95807 157 aa8.85□□□□□ -0.99
HMGXB3-203ENST00000510472 NPBWR1P48145 328 aa8.85□□□□□ -0.99
HMGXB3-203ENST00000510472 UBAC2Q8NBM4 344 aa8.85□□□□□ -0.99
HMGXB3-203ENST00000510472 DUSP18Q8NEJ0 188 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms