RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 C3orf85A0A1B0GTC6 90 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 CHEK1O14757 476 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 ZNF207O43670 478 aaKnown RBP19.78■□□□□ 0.76
SNF8-208ENST00000510195 GNG7O60262 68 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 CD74P04233 296 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 P0C879 139 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 SMIM18P0DKX4 95 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 BMI1P35226 326 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 SSBP1Q04837 148 aaKnown RBP19.78■□□□□ 0.76
SNF8-208ENST00000510195 GPR107Q5VW38 600 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 CCDC71LQ8N9Z2 235 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 TMEM229BQ8NBD8 167 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 GALNT14Q96FL9 552 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 TP53RKQ96S44 253 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 RHPN1-AS1Q9BWJ2 59 aa19.78■□□□□ 0.76
SNF8-208ENST00000510195 PLECQ15149 4684 aaKnown RBP19.78■□□□□ 0.76
SNF8-208ENST00000510195 TRAV14DV4A0A0A6YYC5 116 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 SPRY2O43597 315 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 YIF1AO95070 293 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 IGKV1-5P01602 117 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 PI3P19957 117 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 SNCAP37840 140 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 NPBWR1P48145 328 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 AKR1C2P52895 323 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 TAS2R19P59542 299 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 STPG3Q8N7X2 389 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 RNF2Q99496 336 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 COPZ2Q9P299 210 aa19.77■□□□□ 0.76
SNF8-208ENST00000510195 HYDINQ4G0P3 5121 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 A0A0B4J293 547 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 MRPS10P82664 201 aaKnown RBP19.76■□□□□ 0.75
SNF8-208ENST00000510195 TNFRSF9Q07011 255 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 RNASE12Q5GAN4 147 aaKnown RBP19.76■□□□□ 0.75
SNF8-208ENST00000510195 PVRIGQ6DKI7 326 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 SLC35G3Q8N808 338 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 DUSP18Q8NEJ0 188 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 PINX1Q96BK5 328 aaKnown RBP19.76■□□□□ 0.75
SNF8-208ENST00000510195 GINS3Q9BRX5 216 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 PDCD10Q9BUL8 212 aa19.76■□□□□ 0.75
SNF8-208ENST00000510195 C6orf62Q9GZU0 229 aaPredicted RBP19.76■□□□□ 0.75
SNF8-208ENST00000510195 GABARAPH6UMI1 98 aa19.75■□□□□ 0.75
SNF8-208ENST00000510195 CORTO00230 105 aa19.75■□□□□ 0.75
SNF8-208ENST00000510195 SUB1P53999 127 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNF8-208ENST00000510195 ST8SIA3O43173 380 aa19.74■□□□□ 0.75
SNF8-208ENST00000510195 IFNA17P01571 189 aa19.74■□□□□ 0.75
SNF8-208ENST00000510195 ATF4P18848 351 aaPredicted RBP19.74■□□□□ 0.75
SNF8-208ENST00000510195 UCP1P25874 307 aa19.74■□□□□ 0.75
SNF8-208ENST00000510195 IZUMO4Q1ZYL8 232 aa19.74■□□□□ 0.75
SNF8-208ENST00000510195 ALMS1Q8TCU4 4167 aa19.74■□□□□ 0.75
SNF8-208ENST00000510195 RAB3DO95716 219 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 PPP5CP53041 499 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 TRIM16LQ309B1 348 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 FAM90A2PQ658T7 463 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 STEAP1BQ6NZ63 245 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 OR4D10Q8NGI6 311 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 RNF183Q96D59 192 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 RRNAD1Q96FB5 475 aaKnown RBP19.73■□□□□ 0.75
SNF8-208ENST00000510195 MRPS26Q9BYN8 205 aaKnown RBP19.73■□□□□ 0.75
SNF8-208ENST00000510195 MAP6D1Q9H9H5 199 aa19.73■□□□□ 0.75
SNF8-208ENST00000510195 IGHV3-48P01763 117 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 PAFAH1B2P68402 229 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 MEF2DQ14814 521 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 SCGB2B2Q4G0G5 96 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 FAM219AQ8IW50 185 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 OR13C8Q8NGS7 320 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 RABL2AQ9UBK7 228 aaPredicted RBP19.72■□□□□ 0.75
SNF8-208ENST00000510195 RABL2BQ9UNT1 228 aa19.72■□□□□ 0.75
SNF8-208ENST00000510195 DEFB135Q30KP9 77 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 SPINK9Q5DT21 86 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 TOMM20LQ6UXN7 152 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 ZNF600Q6ZNG1 722 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 GPR141Q7Z602 305 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 MIXL1Q9H2W2 232 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 ENY2Q9NPA8 101 aa19.71■□□□□ 0.75
SNF8-208ENST00000510195 RGS5O15539 181 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 TMEM50AO95807 157 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 RPL5P46777 297 aaKnown RBP19.7■□□□□ 0.74
SNF8-208ENST00000510195 SURF2Q15527 256 aaPredicted RBP19.7■□□□□ 0.74
SNF8-208ENST00000510195 SP6Q3SY56 376 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 AARDQ4LEZ3 155 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 LYG2Q86SG7 212 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 MARCH1Q8TCQ1 289 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 TMEM222Q9H0R3 208 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 VSIRQ9H7M9 311 aa19.7■□□□□ 0.74
SNF8-208ENST00000510195 A0A0J9YWU9 116 aa19.69■□□□□ 0.74
SNF8-208ENST00000510195 CDS2O95674 445 aa19.69■□□□□ 0.74
SNF8-208ENST00000510195 RNASE2P10153 161 aaKnown RBP19.69■□□□□ 0.74
SNF8-208ENST00000510195 ALDH3B2P48448 385 aa19.69■□□□□ 0.74
SNF8-208ENST00000510195 HOXA1P49639 335 aaPredicted RBP19.69■□□□□ 0.74
SNF8-208ENST00000510195 C14orf166Q9Y224 244 aaKnown RBP19.69■□□□□ 0.74
SNF8-208ENST00000510195 EPPK1P58107 5090 aaKnown RBP19.68■□□□□ 0.74
SNF8-208ENST00000510195 SCGB2A1O75556 95 aa19.68■□□□□ 0.74
SNF8-208ENST00000510195 RPL35AP18077 110 aaKnown RBP19.68■□□□□ 0.74
SNF8-208ENST00000510195 ETV6P41212 452 aa19.68■□□□□ 0.74
SNF8-208ENST00000510195 TMEM217Q8N7C4 229 aa19.68■□□□□ 0.74
SNF8-208ENST00000510195 OR52E5Q8NH55 327 aa19.68■□□□□ 0.74
SNF8-208ENST00000510195 RNASE11Q8TAA1 199 aaKnown RBP19.68■□□□□ 0.74
SNF8-208ENST00000510195 SMIM4Q8WVI0 70 aa19.68■□□□□ 0.74
SNF8-208ENST00000510195 PUS1Q9Y606 427 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNF8-208ENST00000510195 IGHV3-49A0A0A0MS15 119 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms