RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 CBLN4Q9NTU7 201 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 IGHV3OR15-7A0A075B7D8 119 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 hADV38S2A0JD32 116 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 GRIFINA4D1Z8 144 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 IER3P46695 156 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF474Q6S9Z5 364 aaPredicted RBP7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 SSX8Q7RTT4 187 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 ATP5L2Q7Z4Y8 100 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 OR8I2Q8N0Y5 310 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 OR1L4Q8NGR5 311 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF586Q9NXT0 402 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 KLF12Q9Y4X4 402 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 PRUNE2Q8WUY3 3088 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 SRRM4A7MD48 611 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 BMPR1BO00238 502 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 TNFRSF13BO14836 293 aaPredicted RBP7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 IGHV1-46P01743 117 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 USF1P22415 310 aaPredicted RBP7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 LYG1Q8N1E2 194 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 C1RLQ9NZP8 487 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 FBXL7Q9UJT9 491 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 C20orf202A1L168 122 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 H0YJW9 148 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 CRYGCP07315 174 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 CEACAM8P31997 349 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 PRRX1P54821 245 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 CT83Q5H943 113 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 BAGE2Q86Y30 109 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 PDPNQ86YL7 162 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 VSTM2AQ8TAG5 236 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 GRAMD2BQ96HH9 432 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 VAMP8Q9BV40 100 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 GAL3ST2Q9H3Q3 398 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 PARD6AQ9NPB6 346 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 A0A1W2PS18 150 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF705FA8MVS1 300 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 NKX2-8O15522 239 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF253O75346 499 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 LINC00614P0C842 121 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF705DP0CH99 300 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF705BP0CI00 300 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 SAA1P0DJI8 122 aaPredicted RBP7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 IBA57Q5T440 356 aaKnown RBP7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 SIGLECL1Q8N7X8 197 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 STXBP6Q8NFX7 210 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 TMEM68Q96MH6 324 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 DNAJC4Q9NNZ3 241 aa7.49□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF324O75467 553 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 TNFSF4P23510 183 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 SELENOVP59797 346 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 NIT1Q86X76 327 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 WFIKKN1Q96NZ8 548 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 NRN1Q9NPD7 142 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 AMMECR1Q9Y4X0 333 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 FAM215AQ9Y5M1 114 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 SOX21Q9Y651 276 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 RAI1Q7Z5J4 1906 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 DSCAMO60469 2012 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 TNRC18O15417 2968 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 A0A1B0GXF2 115 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 TCRBV4S1A1TA0A5B7 111 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 C22orf46C9J442 243 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 CDKN1AP38936 164 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 CCL11P51671 97 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 ERHP84090 104 aaKnown RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 TNFAIP6P98066 277 aaPredicted RBP7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 OR5I1Q13606 314 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF329Q86UD4 541 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 ST6GALNAC6Q969X2 333 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 WDR87Q6ZQQ6 2873 aa7.48□□□□□ -1.21
PDGFRA-208ENST00000509490 IGKV1D-37A0A075B6S9 117 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 CGB1A6NKQ9 187 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 F2Z2F3 143 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 DLEU1O43261 78 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 APOA2P02652 100 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 IGKV1-16P04430 117 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF83P51522 516 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 PLP1P60201 277 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 RPL8P62917 257 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF430Q9H8G1 570 aaPredicted RBP7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 NAT8BQ9UHF3 227 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 CFAP54Q96N23 3096 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 TRBV6-1A0A0K0K1D8 114 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 IGLV2-23P01705 113 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 FRMD6-AS1P0C7T7 363 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 FAM162BQ5T6X4 162 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 ZCCHC24Q8N2G6 241 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 OR9G1Q8NH87 305 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 LEAP2Q969E1 77 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 TMEM186Q96B77 213 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 FXYD5Q96DB9 178 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF492Q9P255 531 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 TBL2Q9Y4P3 447 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 NKX6-3A6NJ46 265 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 M0R1B8 84 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 SPRY3O43610 288 aa7.47□□□□□ -1.21
PDGFRA-208ENST00000509490 MYOD1P15172 320 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms