RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 C2orf83Q53S99 150 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 SPANXN5Q5MJ07 72 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 PSENENQ9NZ42 101 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 K7EPK0 472 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 IFNA4P05014 189 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 OR8U8P0C7N1 319 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 MFAP2P55001 183 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 H2BFSP57053 126 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 RAB32Q13637 225 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 LRRC37A5PQ49AS3 106 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 OR4F17Q8NGA8 305 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 C4orf3Q8WVX3 66 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 DPF1Q92782 380 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 SMIM8Q96KF7 97 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 OR4F4Q96R69 305 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 GNB4Q9HAV0 340 aa11.52□□□□□ -0.57
RNF4-213ENST00000509388 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
RNF4-213ENST00000509388 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.57
RNF4-213ENST00000509388 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 RPS10-NUDT3A0A1W2PQS6 291 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 MT-CO2P00403 227 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
RNF4-213ENST00000509388 OPRK1P41145 380 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 BCAP31P51572 246 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 EXOSC2Q13868 293 aaKnown RBP11.51□□□□□ -0.57
RNF4-213ENST00000509388 KLK9Q2XQG4 91 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 BSXQ3C1V8 233 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 C11orf87Q6NUJ2 197 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 C8orf86Q6ZUL3 223 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 RNASEH2CQ8TDP1 164 aaKnown RBP11.51□□□□□ -0.57
RNF4-213ENST00000509388 VN1R17PQ8TDU5 208 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 KLK9Q9UKQ9 250 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 DMRT1Q9Y5R6 373 aa11.51□□□□□ -0.57
RNF4-213ENST00000509388 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 ANKRD34BA5PLL1 514 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 H3BP45 60 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 PET100P0DJ07 73 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 CXCL3P19876 107 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 TAS2R30P59541 319 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 IL15RAQ13261 267 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 ETFRF1Q6IPR1 90 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 C18orf65Q6ZTR6 163 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 OR1N2Q8NGR9 330 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 RANGRFQ9HD47 186 aaPredicted RBP11.5□□□□□ -0.57
RNF4-213ENST00000509388 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
RNF4-213ENST00000509388 S4R3C0 116 aa11.5□□□□□ -0.57
RNF4-213ENST00000509388 MFSD2BA6NFX1 497 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 TSC22D2O75157 780 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 PF4P02776 101 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 HSPB1P04792 205 aaKnown RBP11.49□□□□□ -0.57
RNF4-213ENST00000509388 CAV2P51636 162 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 MFAP4P55083 255 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 Q56UQ5 140 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 ZNF343Q6P1L6 599 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 Q6ZNX1 250 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 UBAC2Q8NBM4 344 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 OR11H1Q8NG94 326 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 OR11H7Q8NGC8 314 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 PPP1R1CQ8WVI7 109 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 ASB13Q8WXK3 278 aa11.49□□□□□ -0.57
RNF4-213ENST00000509388 ZNF436Q9C0F3 470 aaPredicted RBP11.49□□□□□ -0.57
RNF4-213ENST00000509388 GAR1Q9NY12 217 aaKnown RBP11.49□□□□□ -0.57
RNF4-213ENST00000509388 I3L2K1 104 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 I3L521 148 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 K7EIM0 57 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 CCL24O00175 119 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 CLEC3BP05452 202 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 MYCNOSP40205 109 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 NPBWR1P48145 328 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 RUNX1Q01196 453 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 DEFB136Q30KP8 78 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 PVRIGQ6DKI7 326 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 CLEC19AQ6UXS0 136 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 OR4C12Q96R67 309 aa11.48□□□□□ -0.57
RNF4-213ENST00000509388 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
RNF4-213ENST00000509388 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.47□□□□□ -0.57
RNF4-213ENST00000509388 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 E5RGE8 158 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 LINC01619G3V211 115 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 DEDDO75618 318 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 TMEM50AO95807 157 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 GIPP09681 153 aaPredicted RBP11.47□□□□□ -0.57
RNF4-213ENST00000509388 SLC25A4P12235 298 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 PAX9P55771 341 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 FGL1Q08830 312 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 ZNF616Q08AN1 781 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 THAP6Q8TBB0 222 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 ZNF502Q8TBZ5 544 aa11.47□□□□□ -0.57
RNF4-213ENST00000509388 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms