RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ZNF486Q96H40 463 aaPredicted RBP9.25□□□□□ -0.93
PDPN-208ENST00000509009 TP53RKQ96S44 253 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 MTFP1Q9UDX5 166 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 TRAV14DV4A0A0A6YYC5 116 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 A0A0J9YWU9 116 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 RPL35AP18077 110 aaKnown RBP9.24□□□□□ -0.93
PDPN-208ENST00000509009 BMI1P35226 326 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 CMC4P56277 68 aaPredicted RBP9.24□□□□□ -0.93
PDPN-208ENST00000509009 PIGPP57054 158 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 DEFB135Q30KP9 77 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 SPINK9Q5DT21 86 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 FAM90A2PQ658T7 463 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 ARRDC1Q8N5I2 433 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 STPG3Q8N7X2 389 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 TERB2Q8NHR7 220 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
PDPN-208ENST00000509009 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 MAP6D1Q9H9H5 199 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 EXTL2Q9UBQ6 330 aa9.24□□□□□ -0.93
PDPN-208ENST00000509009 IGHV3OR16-13A0A075B7E8 117 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 IGHV3-74A0A0B4J1X5 117 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 C3orf85A0A1B0GTC6 90 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 GNG7O60262 68 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 GABARAPO95166 117 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 TMEM50AO95807 157 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 SMIM18P0DKX4 95 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 TBPP20226 339 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 SNCAP37840 140 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 ETV6P41212 452 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 SP6Q3SY56 376 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 PVRIGQ6DKI7 326 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 TOMM20LQ6UXN7 152 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 APRG1Q8IVJ8 170 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 OR4D10Q8NGI6 311 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 AP3S1Q92572 193 aa9.23□□□□□ -0.93
PDPN-208ENST00000509009 ST8SIA3O43173 380 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 ATG12O94817 140 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 IFNA17P01571 189 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 CD74P04233 296 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 NPBWR1P48145 328 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 TFPI2P48307 235 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 ZNF124Q15973 351 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 GPR107Q5VW38 600 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 LILRB2Q8N423 598 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 TMEM229BQ8NBD8 167 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 DUSP18Q8NEJ0 188 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 C15orf40Q8WUR7 153 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 MIXL1Q9H2W2 232 aa9.22□□□□□ -0.93
PDPN-208ENST00000509009 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.93
PDPN-208ENST00000509009 EPPK1P58107 5090 aaKnown RBP9.21□□□□□ -0.94
PDPN-208ENST00000509009 IGKV3-7A0A075B6H7 116 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 A0A0G2JRQ6 117 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 CXorf65A6NEN9 183 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 CTDSP2O14595 271 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 RAB3DO95716 219 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 APOHP02749 345 aaPredicted RBP9.21□□□□□ -0.94
PDPN-208ENST00000509009 RNASE2P10153 161 aaKnown RBP9.21□□□□□ -0.94
PDPN-208ENST00000509009 ATF4P18848 351 aaPredicted RBP9.21□□□□□ -0.94
PDPN-208ENST00000509009 UCP1P25874 307 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 MLANAQ16655 118 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 Q6ZRM9 215 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 TCF24Q7RTU0 167 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 GBGT1Q8N5D6 347 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 SLC35G3Q8N808 338 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 OR13C8Q8NGS7 320 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 MARCH1Q8TCQ1 289 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 C6orf62Q9GZU0 229 aaPredicted RBP9.21□□□□□ -0.94
PDPN-208ENST00000509009 CSTL1Q9H114 145 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 VSIRQ9H7M9 311 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 COPZ2Q9P299 210 aa9.21□□□□□ -0.94
PDPN-208ENST00000509009 A0A1B0GU03 582 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 CD5P06127 495 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 AKR1C2P52895 323 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 PPP5CP53041 499 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDPN-208ENST00000509009 TAS2R19P59542 299 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 PMS2P11Q13670 270 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 TRIM16LQ309B1 348 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 SCGB2B2Q4G0G5 96 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 STEAP1BQ6NZ63 245 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 CEMP1Q6PRD7 247 aaPredicted RBP9.2□□□□□ -0.94
PDPN-208ENST00000509009 ZNF600Q6ZNG1 722 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 CCDC71LQ8N9Z2 235 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 ST8SIA2Q92186 375 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 RRNAD1Q96FB5 475 aaKnown RBP9.2□□□□□ -0.94
PDPN-208ENST00000509009 GINS3Q9BRX5 216 aa9.2□□□□□ -0.94
PDPN-208ENST00000509009 FNDC4Q9H6D8 234 aaPredicted RBP9.2□□□□□ -0.94
PDPN-208ENST00000509009 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
PDPN-208ENST00000509009 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDPN-208ENST00000509009 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 GABARAPH6UMI1 98 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 B3GALNT1O75752 331 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 DFFBO76075 338 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 CDS2O95674 445 aa9.19□□□□□ -0.94
PDPN-208ENST00000509009 RPL5P46777 297 aaKnown RBP9.19□□□□□ -0.94
PDPN-208ENST00000509009 ALDH3B2P48448 385 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms