RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MSRB3Q8IXL7 192 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 NATD1Q8N6N6 113 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 ASCC1Q8N9N2 400 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 OR13C2Q8NGS9 318 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 OR51A7Q8NH64 312 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 PLPPR1Q8TBJ4 325 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 CACNG8Q8WXS5 425 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 TESCQ96BS2 214 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 RCN3Q96D15 328 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 PPP3R2Q96LZ3 170 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 RBP7Q96R05 134 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 PANX1Q96RD7 426 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 CHST6Q9GZX3 395 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 OR51I2Q9H344 312 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 C11orf68Q9H3H3 251 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 TMEM27Q9HBJ8 222 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 ZC4H2Q9NQZ6 224 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 MRPL22Q9NWU5 206 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 NOP16Q9Y3C1 178 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 TRAV41A0A0B4J266 112 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 TRAPPC13A5PLN9 417 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 GMNCA6NCL1 334 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 PCP4L1A6NKN8 68 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 CDC42EP2O14613 210 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 PLIN3O60664 434 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 FGF4P08620 206 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 P0DMU3 169 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM231AP0DMU4 169 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM231CP0DMU5 169 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 MYL2P10916 166 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 RAB3AP20336 220 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 ALDH3A1P30838 453 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 IFNA8P32881 189 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 OR1E2P47887 323 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 PLTPP55058 493 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 FXYD6P3P58550 94 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 NCALDP61601 193 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 EMX2Q04743 252 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 PRKCDQ05655 676 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 DEFB114Q30KQ6 69 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 C6orf226Q5I0X4 101 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 SOHLH1Q5JUK2 328 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 ANXA8L1Q5VT79 327 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF660Q6AZW8 331 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 TTC33Q6PID6 262 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 HAGHLQ6PII5 290 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 Q8NAQ8 132 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 CYB561A3Q8NBI2 242 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 RNF170Q96K19 258 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 PKNOX2Q96KN3 472 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 SPACA5Q96QH8 159 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 RSG1Q9BU20 258 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 GON7Q9BXV9 100 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 TMEM38AQ9H6F2 299 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 WDR55Q9H6Y2 383 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 TPT1P8Q9HAU6 139 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 HES4Q9HCC6 221 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 PARP11Q9NR21 331 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC2A8Q9NY64 477 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 C21orf62Q9NYP8 219 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 CALML5Q9NZT1 146 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 CYB5R1Q9UHQ9 305 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 SNX12Q9UMY4 172 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC22A13Q9Y226 551 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 POLR1DQ9Y2S0 133 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 GOLT1BQ9Y3E0 138 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 LINC00312Q9Y6C7 94 aa1.92□□□□□ -2.1
TOPBP1-206ENST00000508524 IGHV1-3A0A0C4DH29 117 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 NBDYA0A0U1RRE5 68 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 OOSP1A8MZH6 123 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC22A5O76082 557 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 SERPINA1P01009 418 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 IFNA10P01566 189 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 PTMSP20962 102 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 S100A3P33764 101 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 GPX4P36969 197 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 GUCA1AP43080 201 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 GNG10P50151 68 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 ACTBP60709 375 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 LRRC74AQ0VAA2 488 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 KRR1Q13601 381 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 APOFQ13790 326 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 SMIM21Q3B7S5 101 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 HEPN1Q6WQI6 88 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 C4orf33Q8N1A6 199 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC35F6Q8N357 371 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 OR11H2Q8NH07 326 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 RPEQ96AT9 228 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 REEP6Q96HR9 211 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 OR52E6Q96RD3 313 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 AMELYQ99218 206 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 MICU1Q9BPX6 476 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM103A1Q9BTL3 118 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 RTL8AQ9BWD3 113 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 ARMC7Q9H6L4 198 aa1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 STX18Q9P2W9 335 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-206ENST00000508524 TRAV10A0A0B4J240 114 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 hADV38S2A0JD32 116 aa1.9□□□□□ -2.11
TOPBP1-206ENST00000508524 TVP23AA6NH52 213 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms