RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
SKP2-204ENST00000508514 H2BFWTQ7Z2G1 175 aa13.16□□□□□ -0.3
SKP2-204ENST00000508514 OR4A16Q8NH70 328 aa13.16□□□□□ -0.3
SKP2-204ENST00000508514 FUNDC2Q9BWH2 189 aa13.16□□□□□ -0.3
SKP2-204ENST00000508514 SCPEP1Q9HB40 452 aa13.16□□□□□ -0.3
SKP2-204ENST00000508514 A0A087WXM4 84 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 TRAV14DV4A0A0A6YYC5 116 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 A0A0B4J293 547 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 PI3P19957 117 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 TOMM20LQ6UXN7 152 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 CMTM3Q96MX0 182 aa13.15□□□□□ -0.3
SKP2-204ENST00000508514 RCVRNP35243 200 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 ST8SIA2Q92186 375 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
SKP2-204ENST00000508514 TP53RKQ96S44 253 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 CSTL1Q9H114 145 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 ZFAND3Q9H8U3 227 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 KLK11Q9UBX7 282 aa13.14□□□□□ -0.31
SKP2-204ENST00000508514 RPP25LQ8N5L8 163 aaKnown RBP13.13□□□□□ -0.31
SKP2-204ENST00000508514 FAM24BQ8N5W8 94 aa13.13□□□□□ -0.31
SKP2-204ENST00000508514 VSIRQ9H7M9 311 aa13.13□□□□□ -0.31
SKP2-204ENST00000508514 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
SKP2-204ENST00000508514 A0A1B0GU03 582 aa13.12□□□□□ -0.31
SKP2-204ENST00000508514 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
SKP2-204ENST00000508514 GNG7O60262 68 aa13.12□□□□□ -0.31
SKP2-204ENST00000508514 RND3P61587 244 aa13.12□□□□□ -0.31
SKP2-204ENST00000508514 MLANAQ16655 118 aa13.12□□□□□ -0.31
SKP2-204ENST00000508514 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
SKP2-204ENST00000508514 TCF24Q7RTU0 167 aa13.12□□□□□ -0.31
SKP2-204ENST00000508514 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
SKP2-204ENST00000508514 IGHV3-66A0A0C4DH42 116 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 INS-IGF2F8WCM5 200 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 ST8SIA3O43173 380 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 DFFBO76075 338 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 TMEM50AO95807 157 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 S100GP29377 79 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
SKP2-204ENST00000508514 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
SKP2-204ENST00000508514 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
SKP2-204ENST00000508514 PUS1Q9Y606 427 aaKnown RBP eCLIP13.11□□□□□ -0.31
SKP2-204ENST00000508514 DNAH10Q8IVF4 4471 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 A0A0G2JRQ6 117 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 TNFAIP8O95379 198 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 CD3DP04234 171 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 RNASE2P10153 161 aaKnown RBP13.1□□□□□ -0.31
SKP2-204ENST00000508514 ETV6P41212 452 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
SKP2-204ENST00000508514 PIGPP57054 158 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 OR52I2Q8NH67 350 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 ABHD1Q96SE0 405 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 RARRES2Q99969 163 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 FNDC4Q9H6D8 234 aaPredicted RBP13.1□□□□□ -0.31
SKP2-204ENST00000508514 VCX3AQ9NNX9 186 aa13.1□□□□□ -0.31
SKP2-204ENST00000508514 KLK5Q9Y337 293 aaPredicted RBP13.1□□□□□ -0.31
SKP2-204ENST00000508514 DEDDO75618 318 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 GIG44P09565 113 aaPredicted RBP13.09□□□□□ -0.31
SKP2-204ENST00000508514 PGAM2P15259 253 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 NANOS2P60321 138 aaKnown RBP13.09□□□□□ -0.31
SKP2-204ENST00000508514 SP6Q3SY56 376 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 LEMD1Q68G75 181 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 Q6ZRM9 215 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 TMEM217Q8N7C4 229 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 DUSP18Q8NEJ0 188 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
SKP2-204ENST00000508514 VPS13DQ5THJ4 4388 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 NPBWR1P48145 328 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 RORCP51449 518 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 DEFB131AP59861 70 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 CTF1Q16619 201 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 ZNF600Q6ZNG1 722 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 ZNF486Q96H40 463 aaPredicted RBP13.08□□□□□ -0.32
SKP2-204ENST00000508514 C6orf62Q9GZU0 229 aaPredicted RBP13.08□□□□□ -0.32
SKP2-204ENST00000508514 MTFP1Q9UDX5 166 aa13.08□□□□□ -0.32
SKP2-204ENST00000508514 DEFB4AO15263 64 aa13.07□□□□□ -0.32
SKP2-204ENST00000508514 BSXQ3C1V8 233 aa13.07□□□□□ -0.32
SKP2-204ENST00000508514 RNASE10Q5GAN6 216 aaKnown RBP13.07□□□□□ -0.32
SKP2-204ENST00000508514 GINS3Q9BRX5 216 aa13.07□□□□□ -0.32
SKP2-204ENST00000508514 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 CA1P00915 261 aaPredicted RBP13.06□□□□□ -0.32
SKP2-204ENST00000508514 IFNA17P01571 189 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 CD74P04233 296 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 SNCAP37840 140 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 PPP5CP53041 499 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 SLC35G3Q8N808 338 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 OR13C8Q8NGS7 320 aa13.06□□□□□ -0.32
SKP2-204ENST00000508514 C11orf68Q9H3H3 251 aaKnown RBP13.06□□□□□ -0.32
SKP2-204ENST00000508514 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
SKP2-204ENST00000508514 CLN5O75503 358 aa13.05□□□□□ -0.32
SKP2-204ENST00000508514 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms