RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 UMAD1C9J7I0 102 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 M0R1W7 72 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PPP1R2P9O14990 202 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FCGR3AP08637 254 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 RPL35AP18077 110 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 COX19Q49B96 90 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 WDR38Q5JTN6 314 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TEX38Q6PEX7 206 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 RNF165Q6ZSG1 346 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 POC1AQ8NBT0 407 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 C10orf105Q8TEF2 133 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PRADC1Q9BSG0 188 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 QTRT1Q9BXR0 403 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 SEC11CQ9BY50 192 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 LAMTOR3Q9UHA4 124 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV26-1A0A087WT03 109 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM129A0AVI4 362 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 DUSP14O95147 198 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 COX5BP10606 129 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 GYPEP15421 78 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 HIST1H1DP16402 221 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 DAPP51397 102 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 HLA-DRB3P79483 266 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FAM27BQ5VT28 67 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 KLHDC1Q8N7A1 406 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 C8orf31Q8N9H6 132 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 OR52I2Q8NH67 350 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF488Q96MN9 340 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PSMG3-AS1Q96PY0 264 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 ALKBH7Q9BT30 221 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FBXL7Q9UJT9 491 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CHST2Q9Y4C5 530 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 SRRM5B3KS81 715 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CRLF1O75462 422 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FABP4P15090 132 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CCKARP32238 428 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PSMG4Q5JS54 123 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 LCN12Q6JVE5 192 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 DYRK2Q92630 601 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 MAP1LC3CQ9BXW4 147 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 LYRM2Q9NU23 88 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TBL2Q9Y4P3 447 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IGLV3-32A0A0A0MS00 114 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV39A0A0B4J263 110 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CENPVL1A0A0U1RR11 272 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 A0A1B0GTL3 188 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GEMIN2O14893 280 aaKnown RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 RAMP3O60896 148 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 HPRT1P00492 218 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 HBZP02008 142 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TCRBP04435 133 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GIPP09681 153 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GAS1P54826 345 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ISL1P61371 349 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 EFNB3Q15768 340 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ALKAL2Q6UX46 152 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 LEAP2Q969E1 77 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 PGLYRP3Q96LB9 341 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GPR82Q96P67 336 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CHCHD5Q9BSY4 110 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SIGLEC7Q9Y286 467 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 USP17L23D6RBM5 183 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV2-5P01817 119 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GPR183P32249 361 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 PSG9Q00887 426 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 LOXL1Q08397 574 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM241Q24JQ0 296 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM155Q4W5P6 130 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 KHDC3LQ587J8 217 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 AWAT1Q58HT5 328 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SERTAD4-AS1Q5TG53 156 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ACP7Q6ZNF0 438 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF295-AS1Q8N0V1 137 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 IL17DQ8TAD2 202 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ABHD14BQ96IU4 210 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GPX7Q96SL4 187 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 PSORS1C1Q9UIG5 152 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 KLK5Q9Y337 293 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 SPTBN4Q9H254 2564 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM189A5PLL7 270 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM238C9JI98 176 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 LINC01619G3V211 115 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 H3BTX0 84 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 IFI6P09912 130 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 HOXB4P17483 251 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 POLR2IP36954 125 aaKnown RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 KRTDAPP60985 99 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 DGCR2P98153 550 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR10J3Q5JRS4 329 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 C10orf128Q5T292 105 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CLEC19AQ6UXS0 136 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 GLDNQ6ZMI3 551 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR10G4Q8NGN3 311 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR10G9Q8NGN4 311 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 OR10G7Q8NGN6 311 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 ARPC1AQ92747 370 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 CTHRC1Q96CG8 243 aa2.45□□□□□ -2.02
NEDD4-208ENST00000508342 RBM38Q9H0Z9 239 aaKnown RBP2.45□□□□□ -2.02
NEDD4-208ENST00000508342 TNFRSF12AQ9NP84 129 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms