RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RASSF5Q8WWW0 418 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 C2orf50Q96LR7 162 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 C20orf166-AS1Q96NR2 134 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 GINS3Q9BRX5 216 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 DOHHQ9BU89 302 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 OR8D2Q9GZM6 311 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 PCBD2Q9H0N5 130 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 PARVBQ9HBI1 364 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 PSORS1C2Q9UIG4 136 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 ERGIC3Q9Y282 383 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 MIA2Q96PC5 1412 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 SIPA1L1O43166 1804 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 KIF13BQ9NQT8 1826 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 SHROOM3Q8TF72 1996 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 TRAV7A0A075B6U4 112 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 IGKV1D-43A0A0B4J1Z2 117 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 H0YJX3 145 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 H7C1C5 153 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 J3QQQ9 107 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 P0C880 135 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 YPEL3P61236 119 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 RPL26P61254 145 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 LCN6P62502 163 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 RALGAPA2Q2PPJ7 1873 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 MIR17HGQ75NE6 70 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 TCF24Q7RTU0 167 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 CROCCP2Q86T23 111 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 TMEM86AQ8N2M4 240 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 RPP25LQ8N5L8 163 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 TMEM106AQ96A25 262 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 DOCK6Q96HP0 2047 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 SERPINI1Q99574 410 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 TRPM6Q9BX84 2022 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 LYRM2Q9NU23 88 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 MED29Q9NX70 200 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 REREQ9P2R6 1566 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 TP73-AS1Q9UF72 201 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 SS18L2Q9UHA2 77 aa2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 RPL26L1Q9UNX3 145 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-209ENST00000508304 SHANK3Q9BYB0 1731 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 IGHV3-64A0A075B6Q5 118 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 HMSDA8MTL9 139 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 OR2J2O76002 312 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 APOA2P02652 100 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 CRHP06850 196 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 DEFA4P12838 97 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 CYBAP13498 195 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 PIGPP57054 158 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 GNG5P63218 68 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 KHDC3LQ587J8 217 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 BRD3OSQ6XYD6 125 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 HIST3H2BBQ8N257 126 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZNF439Q8NDP4 499 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 WFDC11Q8NEX6 87 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZNF471Q9BX82 626 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 CHST6Q9GZX3 395 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 OSTCQ9NRP0 149 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 UFC1Q9Y3C8 167 aa2.03□□□□□ -2.08
TRAPPC13-209ENST00000508304 SCN10AQ9Y5Y9 1956 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 PPP5D1E7EU14 171 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 TRAPPC2LH3BP13 241 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 IFNA21P01568 189 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 TRGC1P0CF51 173 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 IDO1P14902 403 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 SPI1P17947 270 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 SRP14P37108 136 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 ATP5G3P48201 142 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 EVX1P49640 407 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 CRYBA4P53673 196 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 CDC42P60953 191 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 RELAQ04206 551 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 SCGB2B2Q4G0G5 96 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 BCL2L15Q5TBC7 163 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 HCP5Q6MZN7 132 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 AAED1Q7RTV5 226 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 GRINAQ7Z429 371 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 LRRC28Q86X40 367 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 IFT20Q8IY31 132 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 C11orf40Q8WZ69 217 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 DNAJC30Q96LL9 226 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 IMUPQ9GZP8 106 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 ACER3Q9NUN7 267 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 CKLFQ9UBR5 152 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 PRNDQ9UKY0 176 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 CCL26Q9Y258 94 aa2.02□□□□□ -2.09
TRAPPC13-209ENST00000508304 TRBV19A0A075B6N1 114 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 TRAV4A0A0B4J268 109 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 TRGV4A0A0C4DH28 118 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 IGHV1-18A0A0C4DH31 117 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 ARRDC5A6NEK1 342 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 CCL5P13501 91 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 PEBP1P30086 187 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 EIF5AP63241 154 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 SUPT4H1P63272 117 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 FOXF1Q12946 379 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 FAM27BQ5VT28 67 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 LCA10Q71F78 164 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 AKAP14Q86UN6 197 aa2.01□□□□□ -2.09
TRAPPC13-209ENST00000508304 LINC00471Q8N535 108 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms