RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PIGPP57054 158 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 FAM24BQ8N5W8 94 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 OR10K1Q8NGX5 313 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 DYDC1Q8WWB3 177 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 IMUPQ9GZP8 106 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 CHST6Q9GZX3 395 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 SLC39A9Q9NUM3 307 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 NDUFAF1Q9Y375 327 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 MINOS1-NBL1R4GNA1 71 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 HSPE1-MOB4S4R3N1 261 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 TRIOBPQ9H2D6 2365 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 ZNF106Q9H2Y7 1883 aaKnown RBP2.11□□□□□ -2.07
DHFR-204ENST00000508282 PTPRSQ13332 1948 aa2.11□□□□□ -2.07
DHFR-204ENST00000508282 NACADO15069 1562 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 ECM29Q5VYK3 1845 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 FMN1Q68DA7 1419 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 TRAV41A0A0B4J266 112 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 MAP1LC3B2A6NCE7 125 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 C11orf86A6NJI1 115 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 SIGLEC16A6NMB1 481 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 GNRH2O43555 120 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 OR2J2O76002 312 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 APOA2P02652 100 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 BPGMP07738 259 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 MSMBP08118 114 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 ZNF728P0DKX0 622 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 PSMB8P28062 276 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 ALDH3A1P30838 453 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 ALX1Q15699 326 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 SCGB2B2Q4G0G5 96 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 LHFPL1Q86WI0 220 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 DNAJC9Q8WXX5 260 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 MALSU1Q96EH3 234 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 LYSMD1Q96S90 227 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 IMMP2LQ96T52 175 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 SERPINI1Q99574 410 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 OR8D2Q9GZM6 311 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 MAP1LC3BQ9GZQ8 125 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 BATF3Q9NR55 127 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 NAT8Q9UHE5 227 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 RBM7Q9Y580 266 aaKnown RBP2.1□□□□□ -2.07
DHFR-204ENST00000508282 TIMM22Q9Y584 194 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 FAM215AQ9Y5M1 114 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 SLX4Q8IY92 1834 aa2.1□□□□□ -2.07
DHFR-204ENST00000508282 FHAD1B1AJZ9 1412 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 TRGV5A0A0B4J1U4 118 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 A0A0J9YX75 114 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 G3V3Q6 166 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 TRAPPC2LH3BP13 241 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 BUB1B-PAK6H3BSN5 160 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 H3BT86 120 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 CCL5P13501 91 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 RPS4Y1P22090 263 aaKnown RBP2.09□□□□□ -2.07
DHFR-204ENST00000508282 S100GP29377 79 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 GLRXP35754 106 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 CCR2P41597 374 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 EMP1P54849 157 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 ARPC4P59998 168 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 TPI1P60174 286 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 CDC42P60953 191 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 SARNPP82979 210 aaKnown RBP2.09□□□□□ -2.07
DHFR-204ENST00000508282 DCUN1D2Q6PH85 259 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 Q6ZS52 159 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 LCA10Q71F78 164 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 TRAPPC6BQ86SZ2 158 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 PBOV1Q9GZY1 135 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 RNF122Q9H9V4 155 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 C8orf4Q9NR00 106 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 ERGIC3Q9Y282 383 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 AMMECR1Q9Y4X0 333 aaPredicted RBP2.09□□□□□ -2.07
DHFR-204ENST00000508282 TIMM9Q9Y5J7 89 aa2.09□□□□□ -2.07
DHFR-204ENST00000508282 UHRF1BP1Q6BDS2 1440 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 CCDC88AQ3V6T2 1871 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 RIIAD1A6NNX1 92 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 C1orf196B1AJZ1 125 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 SLC22A1O15245 554 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 CYB5BO43169 146 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 ZNF73O43830 326 aaPredicted RBP2.08□□□□□ -2.08
DHFR-204ENST00000508282 IGLV6-57P01721 117 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 RPL28P46779 137 aaKnown RBP2.08□□□□□ -2.08
DHFR-204ENST00000508282 ZNF80P51504 273 aaPredicted RBP2.08□□□□□ -2.08
DHFR-204ENST00000508282 YPEL3P61236 119 aaPredicted RBP2.08□□□□□ -2.08
DHFR-204ENST00000508282 BAMBIQ13145 260 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 TMEM78Q5T7P6 136 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 SLC35E3Q7Z769 313 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 PHF13Q86YI8 300 aaPredicted RBP2.08□□□□□ -2.08
DHFR-204ENST00000508282 BPIFA4PQ86YQ2 179 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 OR4C16Q8NGL9 310 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 SCGB3A1Q96QR1 104 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 TM2D3Q9BRN9 247 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 GREB1Q4ZG55 1949 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 WDR90Q96KV7 1748 aa2.08□□□□□ -2.08
DHFR-204ENST00000508282 ZCCHC6Q5VYS8 1495 aaKnown RBP2.07□□□□□ -2.08
DHFR-204ENST00000508282 SCN9AQ15858 1988 aa2.07□□□□□ -2.08
DHFR-204ENST00000508282 LOC105371267A0A1B0GV96 52 aa2.07□□□□□ -2.08
DHFR-204ENST00000508282 A0A1W2PNM2 257 aa2.07□□□□□ -2.08
DHFR-204ENST00000508282 ORC5O43913 435 aa2.07□□□□□ -2.08
DHFR-204ENST00000508282 CST8O60676 142 aa2.07□□□□□ -2.08
DHFR-204ENST00000508282 CTSGP08311 255 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms